Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

2-oxoisovalerate dehydrogenase, E1 component, beta subunit

Gene

SERP1077

Organism
Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Enzyme and pathway databases

BioCyciSEPI176279:GJJB-1104-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
2-oxoisovalerate dehydrogenase, E1 component, beta subunitImported (EC:1.2.4.1Imported)
Gene namesi
Ordered Locus Names:SERP1077Imported
OrganismiStaphylococcus epidermidis (strain ATCC 35984 / RP62A)Imported
Taxonomic identifieri176279 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesStaphylococcus
ProteomesiUP000000531 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi176279.SERP1077.

Structurei

3D structure databases

ProteinModelPortaliQ5HP36.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0022.
HOGENOMiHOG000281451.
KOiK00167.
OMAiDTKGLML.
OrthoDBiEOG6JQH4C.

Family and domain databases

Gene3Di3.40.50.920. 1 hit.
3.40.50.970. 1 hit.
InterProiIPR029061. THDP-binding.
IPR009014. Transketo_C/Pyr-ferredox_oxred.
IPR005475. Transketolase-like_Pyr-bd.
IPR005476. Transketolase_C.
[Graphical view]
PfamiPF02779. Transket_pyr. 1 hit.
PF02780. Transketolase_C. 1 hit.
[Graphical view]
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 1 hit.
SSF52922. SSF52922. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5HP36-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTKLSYLEAI QNAQDLALNH FSNAFILGED VGKKGGVFGT TKGLQSKYGD
60 70 80 90 100
ERVIDTPLAE SNIIGTAIGA AMLGKRPIAE IQFADFILPA TNQIISEAAK
110 120 130 140 150
MRYRSNNDWN CPLTIRAPFG GGVHGGLYHS QSVESIFAST PGLTIVIPSS
160 170 180 190 200
PYDAKGLLLS SIESNDPVLY FEHKKAYRFL KEEVPETYYT VPLGKADVKR
210 220 230 240 250
PGEDITVFCY GLMVNYCLQA ADILANDGID VEVVDLRTVY PLDKATIIER
260 270 280 290 300
SQRTGKVLLV TEDNLEGSIM SEVSAIIAEN CLFDLDAPIM RLAAPDVPSM
310 320
PFSPTLENEI MMNPEKIQDK MRELAQF
Length:327
Mass (Da):35,907
Last modified:February 15, 2005 - v1
Checksum:iB250776A58D7E575
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000029 Genomic DNA. Translation: AAW54443.1.
RefSeqiWP_001830933.1. NC_002976.3.
YP_188654.1. NC_002976.3.

Genome annotation databases

EnsemblBacteriaiAAW54443; AAW54443; SERP1077.
KEGGiser:SERP1077.
PATRICi19613011. VBIStaEpi130894_1048.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000029 Genomic DNA. Translation: AAW54443.1.
RefSeqiWP_001830933.1. NC_002976.3.
YP_188654.1. NC_002976.3.

3D structure databases

ProteinModelPortaliQ5HP36.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi176279.SERP1077.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAW54443; AAW54443; SERP1077.
KEGGiser:SERP1077.
PATRICi19613011. VBIStaEpi130894_1048.

Phylogenomic databases

eggNOGiCOG0022.
HOGENOMiHOG000281451.
KOiK00167.
OMAiDTKGLML.
OrthoDBiEOG6JQH4C.

Enzyme and pathway databases

BioCyciSEPI176279:GJJB-1104-MONOMER.

Family and domain databases

Gene3Di3.40.50.920. 1 hit.
3.40.50.970. 1 hit.
InterProiIPR029061. THDP-binding.
IPR009014. Transketo_C/Pyr-ferredox_oxred.
IPR005475. Transketolase-like_Pyr-bd.
IPR005476. Transketolase_C.
[Graphical view]
PfamiPF02779. Transket_pyr. 1 hit.
PF02780. Transketolase_C. 1 hit.
[Graphical view]
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 1 hit.
SSF52922. SSF52922. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Insights on evolution of virulence and resistance from the complete genome analysis of an early methicillin-resistant Staphylococcus aureus strain and a biofilm-producing methicillin-resistant Staphylococcus epidermidis strain."
    Gill S.R., Fouts D.E., Archer G.L., Mongodin E.F., DeBoy R.T., Ravel J., Paulsen I.T., Kolonay J.F., Brinkac L.M., Beanan M.J., Dodson R.J., Daugherty S.C., Madupu R., Angiuoli S.V., Durkin A.S., Haft D.H., Vamathevan J.J., Khouri H.
    , Utterback T.R., Lee C., Dimitrov G., Jiang L., Qin H., Weidman J., Tran K., Kang K.H., Hance I.R., Nelson K.E., Fraser C.M.
    J. Bacteriol. 187:2426-2438(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35984 / RP62AImported.

Entry informationi

Entry nameiQ5HP36_STAEQ
AccessioniPrimary (citable) accession number: Q5HP36
Entry historyi
Integrated into UniProtKB/TrEMBL: February 15, 2005
Last sequence update: February 15, 2005
Last modified: June 24, 2015
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.