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Protein
Submitted name:

Transcriptional regulator TcaR

Gene

tcaR

Organism
Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulator TcaRImported
Gene namesi
Name:tcaRImported
Ordered Locus Names:SERP1949Imported
OrganismiStaphylococcus epidermidis (strain ATCC 35984 / RP62A)Imported
Taxonomic identifieri176279 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesStaphylococcaceaeStaphylococcus
Proteomesi
  • UP000000531 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PRIDEiQ5HLN6.

Interactioni

Protein-protein interaction databases

DIPiDIP-59325N.
STRINGi176279.SERP1949.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3KP2X-ray2.55A/B1-151[»]
3KP3X-ray3.20A/B1-151[»]
3KP4X-ray2.84A/B1-151[»]
3KP5X-ray3.00A/B1-151[»]
3KP6X-ray2.45A/B1-151[»]
3KP7X-ray2.30A/B1-151[»]
4EJTX-ray3.00A/B1-151[»]
4EJUX-ray2.40A/B1-151[»]
4EJVX-ray2.90A/B1-151[»]
4EJWX-ray2.80A/B1-151[»]
ProteinModelPortaliQ5HLN6.
SMRiQ5HLN6.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ5HLN6.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 142HTH marR-typeInterPro annotationAdd BLAST142

Phylogenomic databases

eggNOGiENOG41062A4. Bacteria.
ENOG410XUB6. LUCA.
HOGENOMiHOG000280237.
KOiK21454.
OMAiKGLVEWD.

Family and domain databases

CDDicd00090. HTH_ARSR. 1 hit.
Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR011991. ArsR-like_HTH.
IPR000835. HTH_MarR-typ.
IPR036388. WH-like_DNA-bd_sf.
IPR036390. WH_DNA-bd_sf.
SMARTiView protein in SMART
SM00347. HTH_MARR. 1 hit.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiView protein in PROSITE
PS50995. HTH_MARR_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5HLN6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVRRIEDHIS FLEKFINDVN TLTAKLLKDL QTEYGISAEQ SHVLNMLSIE
60 70 80 90 100
ALTVGQITEK QGVNKAAVSR RVKKLLNAEL VKLEKPDSNT DQRLKIIKLS
110 120 130 140 150
NKGKKYIKER KAIMSHIASD MTSDFDSKEI EKVRQVLEII DYRIQSYTSK

L
Length:151
Mass (Da):17,348
Last modified:February 15, 2005 - v1
Checksum:i600536DFEFD5399D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000029 Genomic DNA. Translation: AAW52831.1.
RefSeqiWP_001832914.1. NC_002976.3.

Genome annotation databases

EnsemblBacteriaiAAW52831; AAW52831; SERP1949.
KEGGiser:SERP1949.

Similar proteinsi

Entry informationi

Entry nameiQ5HLN6_STAEQ
AccessioniPrimary (citable) accession number: Q5HLN6
Entry historyiIntegrated into UniProtKB/TrEMBL: February 15, 2005
Last sequence update: February 15, 2005
Last modified: October 25, 2017
This is version 93 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported