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Q5HKZ1

- Q5HKZ1_STAEQ

UniProt

Q5HKZ1 - Q5HKZ1_STAEQ

Protein
Submitted name:

Transcriptional regulator, MarR family

Gene

SERP2196

Organism
Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 72 (01 Oct 2014)
      Sequence version 1 (15 Feb 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA binding Source: UniProtKB-KW
    2. sequence-specific DNA binding transcription factor activity Source: InterPro

    GO - Biological processi

    1. transcription, DNA-templated Source: UniProtKB-KW

    Keywords - Biological processi

    Transcription, Transcription regulationUniRule annotation

    Keywords - Ligandi

    DNA-bindingUniRule annotation

    Enzyme and pathway databases

    BioCyciSEPI176279:GJJB-2273-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Transcriptional regulator, MarR familyImported
    Gene namesi
    Ordered Locus Names:SERP2196Imported
    OrganismiStaphylococcus epidermidis (strain ATCC 35984 / RP62A)Imported
    Taxonomic identifieri176279 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesStaphylococcus
    ProteomesiUP000000531: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. intracellular Source: InterPro

    Interactioni

    Protein-protein interaction databases

    STRINGi176279.SERP2196.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4HBLX-ray2.50A/B/C/D1-146[»]
    ProteinModelPortaliQ5HKZ1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains 2 HTH marR-type DNA-binding domains.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG1846.
    HOGENOMiHOG000221448.
    OMAiDKQLCFA.
    OrthoDBiEOG6SR975.

    Family and domain databases

    Gene3Di1.10.10.10. 1 hit.
    InterProiIPR000835. HTH_MarR-typ.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view]
    PfamiPF01047. MarR. 1 hit.
    [Graphical view]
    PRINTSiPR00598. HTHMARR.
    SMARTiSM00347. HTH_MARR. 1 hit.
    [Graphical view]
    PROSITEiPS50995. HTH_MARR_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q5HKZ1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKQEQMRLAN QLCFSAYNVS RLFAQFYEKK LKQFGITYSQ YLVLLTLWEE    50
    NPQTLNSIGR HLDLSSNTLT PLLKRLEQSG WVKRERQQSD KRQLIITLTD 100
    NGQQQQEAVF EAISSCLPQE FDTTEYDETK YVFEELEQTL KHLIEK 146
    Length:146
    Mass (Da):17,302
    Last modified:February 15, 2005 - v1
    Checksum:i6440549D2E5EC4A0
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000029 Genomic DNA. Translation: AAW53014.1.
    RefSeqiYP_189752.1. NC_002976.3.

    Genome annotation databases

    EnsemblBacteriaiAAW53014; AAW53014; SERP2196.
    GeneIDi3241553.
    KEGGiser:SERP2196.
    PATRICi19615296. VBIStaEpi130894_2137.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000029 Genomic DNA. Translation: AAW53014.1 .
    RefSeqi YP_189752.1. NC_002976.3.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4HBL X-ray 2.50 A/B/C/D 1-146 [» ]
    ProteinModelPortali Q5HKZ1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 176279.SERP2196.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAW53014 ; AAW53014 ; SERP2196 .
    GeneIDi 3241553.
    KEGGi ser:SERP2196.
    PATRICi 19615296. VBIStaEpi130894_2137.

    Phylogenomic databases

    eggNOGi COG1846.
    HOGENOMi HOG000221448.
    OMAi DKQLCFA.
    OrthoDBi EOG6SR975.

    Enzyme and pathway databases

    BioCyci SEPI176279:GJJB-2273-MONOMER.

    Family and domain databases

    Gene3Di 1.10.10.10. 1 hit.
    InterProi IPR000835. HTH_MarR-typ.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view ]
    Pfami PF01047. MarR. 1 hit.
    [Graphical view ]
    PRINTSi PR00598. HTHMARR.
    SMARTi SM00347. HTH_MARR. 1 hit.
    [Graphical view ]
    PROSITEi PS50995. HTH_MARR_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Insights on evolution of virulence and resistance from the complete genome analysis of an early methicillin-resistant Staphylococcus aureus strain and a biofilm-producing methicillin-resistant Staphylococcus epidermidis strain."
      Gill S.R., Fouts D.E., Archer G.L., Mongodin E.F., DeBoy R.T., Ravel J., Paulsen I.T., Kolonay J.F., Brinkac L.M., Beanan M.J., Dodson R.J., Daugherty S.C., Madupu R., Angiuoli S.V., Durkin A.S., Haft D.H., Vamathevan J.J., Khouri H.
      , Utterback T.R., Lee C., Dimitrov G., Jiang L., Qin H., Weidman J., Tran K., Kang K.H., Hance I.R., Nelson K.E., Fraser C.M.
      J. Bacteriol. 187:2426-2438(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 35984 / RP62AImported.
    2. "Oxidation-sensing regulator AbfR regulates oxidative stress responses, bacterial aggregation, and biofilm formation in Staphylococcus epidermidis."
      Liu X., Sun X., Wu Y., Xie C., Zhang W., Wang D., Chen X., Qu D., Gan J., Chen H., Jiang H., Lan L., Yang C.G.
      J. Biol. Chem. 288:3739-3752(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (2.50 ANGSTROMS).

    Entry informationi

    Entry nameiQ5HKZ1_STAEQ
    AccessioniPrimary (citable) accession number: Q5HKZ1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 15, 2005
    Last sequence update: February 15, 2005
    Last modified: October 1, 2014
    This is version 72 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3