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Q5HIB4

- SDRC_STAAC

UniProt

Q5HIB4 - SDRC_STAAC

Protein

Serine-aspartate repeat-containing protein C

Gene

sdrC

Organism
Staphylococcus aureus (strain COL)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 69 (01 Oct 2014)
      Sequence version 1 (15 Feb 2005)
      Previous versions | rss
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    Functioni

    Cell surface-associated protein which possibly mediates interactions of S.aureus with components of the extracellular matrix of higher eukaryotes. May bind calcium By similarity.By similarity

    GO - Biological processi

    1. cell adhesion Source: InterPro

    Keywords - Ligandi

    Calcium

    Enzyme and pathway databases

    BioCyciSAUR93062:GCEP-606-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Serine-aspartate repeat-containing protein C
    Gene namesi
    Name:sdrC
    Ordered Locus Names:SACOL0608
    OrganismiStaphylococcus aureus (strain COL)
    Taxonomic identifieri93062 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesStaphylococcus
    ProteomesiUP000000530: Chromosome

    Subcellular locationi

    Secretedcell wall PROSITE-ProRule annotation; Peptidoglycan-anchor PROSITE-ProRule annotation

    GO - Cellular componenti

    1. cell wall Source: UniProtKB-SubCell
    2. extracellular region Source: UniProtKB-KW
    3. membrane Source: InterPro

    Keywords - Cellular componenti

    Cell wall, Secreted

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 5050Sequence AnalysisAdd
    BLAST
    Chaini51 – 913863Serine-aspartate repeat-containing protein CPRO_0000281390Add
    BLAST
    Propeptidei914 – 94734Removed by sortasePROSITE-ProRule annotationPRO_0000281391Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei913 – 9131Pentaglycyl murein peptidoglycan amidated threoninePROSITE-ProRule annotation

    Keywords - PTMi

    Peptidoglycan-anchor

    Interactioni

    Protein-protein interaction databases

    STRINGi93062.SACOL0608.

    Structurei

    3D structure databases

    ProteinModelPortaliQ5HIB4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini496 – 606111CNA-B 1Add
    BLAST
    Domaini607 – 717111CNA-B 2Add
    BLAST

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni51 – 495445Ligand binding A regionAdd
    BLAST

    Motif

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Motifi910 – 9145LPXTG sorting signalPROSITE-ProRule annotation

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi65 – 167103Thr-richAdd
    BLAST
    Compositional biasi718 – 887170Asp/Ser-richAdd
    BLAST

    Sequence similaritiesi

    Contains 2 CNA-B domains.Curated

    Keywords - Domaini

    Repeat, Signal

    Phylogenomic databases

    eggNOGiNOG12793.
    HOGENOMiHOG000279832.
    KOiK14194.
    OMAiDNTSVKE.
    OrthoDBiEOG6RNQ8T.

    Family and domain databases

    Gene3Di2.60.40.10. 2 hits.
    2.60.40.1280. 1 hit.
    2.60.40.1290. 1 hit.
    InterProiIPR011266. Adhesin_Fg-bd_dom_2.
    IPR008966. Adhesion_dom.
    IPR008454. Collagen-bd_Cna-like_B-typ_dom.
    IPR011252. Fibrogen-bd_dom1.
    IPR019948. Gram-positive_anchor.
    IPR013783. Ig-like_fold.
    IPR019931. LPXTG_anchor.
    IPR005877. YSIRK_signal_dom.
    [Graphical view]
    PfamiPF05738. Cna_B. 2 hits.
    PF00746. Gram_pos_anchor. 1 hit.
    PF10425. SdrG_C_C. 1 hit.
    PF04650. YSIRK_signal. 1 hit.
    [Graphical view]
    SUPFAMiSSF49401. SSF49401. 2 hits.
    TIGRFAMsiTIGR01167. LPXTG_anchor. 1 hit.
    TIGR01168. YSIRK_signal. 1 hit.
    PROSITEiPS50847. GRAM_POS_ANCHORING. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q5HIB4-1 [UniParc]FASTAAdd to Basket

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    MNNKKTATNR KGMIPNRLNK FSIRKYSVGT ASILVGTTLI FGLSGHEAKA    50
    AEHTNGELNQ SKNETTAPSE NKTTKKVDSR QLKDNTQTAT ADQPKVTMSD 100
    SATVKETSSN MQSPQNATAN QSTTKTSNVT TNDKSSTTYS NETDKSNLTQ 150
    AKDVSTTPKT TTIKPRTLNR MAVNTVAAPQ QGTNVNDKVH FSNIDIAIDK 200
    GHVNQTTGKT EFWATSSDVL KLKANYTIDD SVKEGDTFTF KYGQYFRPGS 250
    VRLPSQTQNL YNAQGNIIAK GIYDSTTNTT TYTFTNYVDQ YTNVRGSFEQ 300
    VAFAKRKNAT TDKTAYKMEV TLGNDTYSEE IIVDYGNKKA QPLISSTNYI 350
    NNEDLSRNMT AYVNQPKNTY TKQTFVTNLT GYKFNPNAKN FKIYEVTDQN 400
    QFVDSFTPDT SKLKDVTDQF DVIYSNDNKT ATVDLMKGQT SSNKQYIIQQ 450
    VAYPDNSSTD NGKIDYTLDT DKTKYSWSNS YSNVNGSSTA NGDQKKYNLG 500
    DYVWEDTNKD GKQDANEKGI KGVYVILKDS NGKELDRTTT DENGKYQFTG 550
    LSNGTYSVEF STPAGYTPTT ANVGTDDAVD SDGLTTTGVI KDADNMTLDS 600
    GFYKTPKYSL GDYVWYDSNK DGKQDSTEKG IKGVKVTLQN EKGEVIGTTE 650
    TDENGKYRFD NLDSGKYKVI FEKPAGLTQT GTNTTEDDKD ADGGEVDVTI 700
    TDHDDFTLDN GYYEEETSDS DSDSDSDSDS DSDSDSDSDS DSDSDSDSDS 750
    DSDSDSDSDS DSDSDSDSDS DSDSDSDSDS DSDSDSDSDS DSDSDSDSDS 800
    DSDSDSDSDS DSDSDSDSDS DSDSDSDSDS DSDSDSDSDS DSDSDSDSDS 850
    DSDSDSDSDS DSDSDSDSDS DSDSDNDSDS DSDSDSDAGK HTPAKPMSTV 900
    KDQHKTAKAL PETGSENNNS NNGTLFGGLF AALGSLLLFG RRKKQNK 947
    Length:947
    Mass (Da):102,916
    Last modified:February 15, 2005 - v1
    Checksum:i389C5E6432A97F5E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000046 Genomic DNA. Translation: AAW37717.1.
    RefSeqiYP_185493.1. NC_002951.2.

    Genome annotation databases

    EnsemblBacteriaiAAW37717; AAW37717; SACOL0608.
    GeneIDi3236353.
    KEGGisac:SACOL0608.
    PATRICi19527476. VBIStaAur112458_0591.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000046 Genomic DNA. Translation: AAW37717.1 .
    RefSeqi YP_185493.1. NC_002951.2.

    3D structure databases

    ProteinModelPortali Q5HIB4.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 93062.SACOL0608.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAW37717 ; AAW37717 ; SACOL0608 .
    GeneIDi 3236353.
    KEGGi sac:SACOL0608.
    PATRICi 19527476. VBIStaAur112458_0591.

    Phylogenomic databases

    eggNOGi NOG12793.
    HOGENOMi HOG000279832.
    KOi K14194.
    OMAi DNTSVKE.
    OrthoDBi EOG6RNQ8T.

    Enzyme and pathway databases

    BioCyci SAUR93062:GCEP-606-MONOMER.

    Miscellaneous databases

    PROi Q5HIB4.

    Family and domain databases

    Gene3Di 2.60.40.10. 2 hits.
    2.60.40.1280. 1 hit.
    2.60.40.1290. 1 hit.
    InterProi IPR011266. Adhesin_Fg-bd_dom_2.
    IPR008966. Adhesion_dom.
    IPR008454. Collagen-bd_Cna-like_B-typ_dom.
    IPR011252. Fibrogen-bd_dom1.
    IPR019948. Gram-positive_anchor.
    IPR013783. Ig-like_fold.
    IPR019931. LPXTG_anchor.
    IPR005877. YSIRK_signal_dom.
    [Graphical view ]
    Pfami PF05738. Cna_B. 2 hits.
    PF00746. Gram_pos_anchor. 1 hit.
    PF10425. SdrG_C_C. 1 hit.
    PF04650. YSIRK_signal. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49401. SSF49401. 2 hits.
    TIGRFAMsi TIGR01167. LPXTG_anchor. 1 hit.
    TIGR01168. YSIRK_signal. 1 hit.
    PROSITEi PS50847. GRAM_POS_ANCHORING. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Insights on evolution of virulence and resistance from the complete genome analysis of an early methicillin-resistant Staphylococcus aureus strain and a biofilm-producing methicillin-resistant Staphylococcus epidermidis strain."
      Gill S.R., Fouts D.E., Archer G.L., Mongodin E.F., DeBoy R.T., Ravel J., Paulsen I.T., Kolonay J.F., Brinkac L.M., Beanan M.J., Dodson R.J., Daugherty S.C., Madupu R., Angiuoli S.V., Durkin A.S., Haft D.H., Vamathevan J.J., Khouri H.
      , Utterback T.R., Lee C., Dimitrov G., Jiang L., Qin H., Weidman J., Tran K., Kang K.H., Hance I.R., Nelson K.E., Fraser C.M.
      J. Bacteriol. 187:2426-2438(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: COL.

    Entry informationi

    Entry nameiSDRC_STAAC
    AccessioniPrimary (citable) accession number: Q5HIB4
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 20, 2007
    Last sequence update: February 15, 2005
    Last modified: October 1, 2014
    This is version 69 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3