Q5HDM1 (RPIA_STAAC) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Ribose-5-phosphate isomerase A
EC=5.3.1.6

Alternative name(s):
Phosphoriboisomerase A
Short name=PRI

Gene names

Name:	rpiA
Ordered Locus Names:	SACOL2329

Organism

Staphylococcus aureus (strain COL) [Complete proteome] [HAMAP]

Taxonomic identifier

93062 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Staphylococcus

Protein attributes

Sequence length	228 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	D-ribose 5-phosphate = D-ribulose 5-phosphate. HAMAP MF_00170
Pathway	Carbohydrate degradation; pentose phosphate pathway; D-ribose 5-phosphate from D-ribulose 5-phosphate (non-oxidative stage): step 1/1. HAMAP MF_00170
Sequence similarities	Belongs to the ribose 5-phosphate isomerase family.

Ontologies

Keywords
Molecular function	Isomerase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	pentose-phosphate shunt, non-oxidative branch Inferred from electronic annotation. Source: InterPro
Molecular function	ribose-5-phosphate isomerase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 228	228	Ribose-5-phosphate isomerase A HAMAP MF_00170		PRO_0000158463

Sequences

	Sequence		Length	Mass (Da)
	Q5HDM1 [UniParc]. Last modified February 15, 2005. Version 1. Checksum: AF895A4B7131148A	FASTA	228	25,541
	10 20 30 40 50 60 MKDVKALKLM TLNDVLSQIN GDMTLGIGTG STMELLLPQM AQLIKERGYN ITGVCTSNKI 70 80 90 100 110 120 AFLAKELGIK ICEINDVDHI DLAIDGADEV DPSLNIIKGG GGALFREKVI DEMASRFVVV 130 140 150 160 170 180 VDETKIVQYL GETFKLPVEV DKFNWYQILR KIESYADIKV ERRVNEDVAF ITDNGNYILD 190 200 210 220 CKLPKGIDPY KFHEYLIHLT GVFETGYFLD MADQVIVGTQ EGVKILEK

References

[1]

"Insights on evolution of virulence and resistance from the complete genome analysis of an early methicillin-resistant Staphylococcus aureus strain and a biofilm-producing methicillin-resistant Staphylococcus epidermidis strain." Gill S.R., Fouts D.E., Archer G.L., Mongodin E.F., DeBoy R.T., Ravel J., Paulsen I.T., Kolonay J.F., Brinkac L.M., Beanan M.J., Dodson R.J., Daugherty S.C., Madupu R., Angiuoli S.V., Durkin A.S., Haft D.H., Vamathevan J.J., Khouri H. , Utterback T.R., Lee C., Dimitrov G., Jiang L., Qin H., Weidman J., Tran K., Kang K.H., Hance I.R., Nelson K.E., Fraser C.M. J. Bacteriol. 187:2426-2438(2005) [PubMed: 15774886] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: COL.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000046 Genomic DNA. Translation: AAW37158.1.
RefSeq	YP_187136.1. NC_002951.2.
3D structure databases
ProteinModelPortal	Q5HDM1.
ModBase	Search...
Protein-protein interaction databases
STRING	Q5HDM1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBSTAT00000008670; EBSTAP00000008405; EBSTAG00000008669.
GeneID	3238444.
GenomeReviews	Gene locus SACOL2329 in contig CP000046_GR.
KEGG	sac:SACOL2329.
PATRIC	19530946. VBIStaAur112458_2275.
TIGR	SACOL2329.
Phylogenomic databases
eggNOG	COG0120.
GeneTree	EBGT00050000025309.
HOGENOM	HBG515603.
OMA	NLSLYVD.
PhylomeDB	Q5HDM1.
ProtClustDB	PRK13978.
Enzyme and pathway databases
BioCyc	SAUR93062:SACOL2329-MONOMER.
Family and domain databases
HAMAP	MF_00170. Rib_5P_isom_A. [Tree]
InterPro	IPR004788. Ribose5P_isomerase_typA. IPR020672. Ribose5P_isomerase_typA_subgr. [Graphical view]
KO	K01807.
PANTHER	PTHR11934. RpiA. 1 hit.
Pfam	PF06026. Rib_5-P_isom_A. 1 hit. [Graphical view]
TIGRFAMs	TIGR00021. RpiA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RPIA_STAAC

Accession

Primary (citable) accession number: Q5HDM1

Entry history

Integrated into UniProtKB/Swiss-Prot:	June 7, 2005
Last sequence update:	February 15, 2005
Last modified:	January 25, 2012
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program