Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

HIV Tat-specific factor 1

Gene

HTATSF1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
HIV Tat-specific factor 1Imported
Gene namesi
Name:HTATSF1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome X

Organism-specific databases

EuPathDBiHostDB:ENSG00000102241.11
HGNCiHGNC:5276 HTATSF1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000102241

PTM / Processingi

Proteomic databases

MaxQBiQ5H919
PeptideAtlasiQ5H919
PRIDEiQ5H919

Expressioni

Gene expression databases

BgeeiENSG00000102241
ExpressionAtlasiQ5H919 baseline and differential

Interactioni

Protein-protein interaction databases

MINTiQ5H919

Structurei

3D structure databases

ProteinModelPortaliQ5H919
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini133 – 218RRMInterPro annotationAdd BLAST86

Phylogenomic databases

eggNOGiKOG1548 Eukaryota
ENOG410YD7P LUCA
GeneTreeiENSGT00390000009902
HOGENOMiHOG000202112

Family and domain databases

CDDicd12281 RRM1_TatSF1_like, 1 hit
Gene3Di3.30.70.330, 1 hit
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
IPR034392 TatSF1-like_RRM1
PfamiView protein in Pfam
PF00076 RRM_1, 1 hit
SMARTiView protein in SMART
SM00360 RRM, 1 hit
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 1 hit

Sequencei

Sequence statusi: Fragment.

Q5H919-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGTNLDGND EFDEQLRMQE LYGDGKDGDT QTDAGGEPDS LGQQPTDTPY
60 70 80 90 100
EWDLDKKAWF PKITEDFIAT YQANYGFSND GASSSTANVE DVHARTAEEP
110 120 130 140 150
PQEKAPEPTD ARKKGEKRKA ESGWFHVEED RNTNVYVSGL PPDITVDEFI
160 170 180 190 200
QLMSKFGIIM RDPQTEEFKV KLYKDNQGNL KGDGLCCYLK RESVELALKL
210 220
LDEDEIRGYK LHVEVAKFQL KGE
Length:223
Mass (Da):25,185
Last modified:February 15, 2005 - v1
Checksum:i28AC343341FBC891
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei223Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z97632 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000425695; ENSP00000412420; ENSG00000102241
UCSCiuc065bhy.1 human

Similar proteinsi

Entry informationi

Entry nameiQ5H919_HUMAN
AccessioniPrimary (citable) accession number: Q5H919
Entry historyiIntegrated into UniProtKB/TrEMBL: February 15, 2005
Last sequence update: February 15, 2005
Last modified: May 23, 2018
This is version 97 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health