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Protein
Submitted name:

HIV Tat-specific factor 1

Gene

HTATSF1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
HIV Tat-specific factor 1Imported
Gene namesi
Name:HTATSF1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome X

Organism-specific databases

EuPathDBiHostDB:ENSG00000102241.11.
HGNCiHGNC:5276. HTATSF1.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000102241.

PTM / Processingi

Proteomic databases

MaxQBiQ5H918.
PaxDbiQ5H918.
PeptideAtlasiQ5H918.
PRIDEiQ5H918.

Expressioni

Gene expression databases

BgeeiENSG00000102241.
ExpressionAtlasiQ5H918. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliQ5H918.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini133 – 218RRMInterPro annotationAdd BLAST86

Phylogenomic databases

eggNOGiKOG1548. Eukaryota.
ENOG410YD7P. LUCA.
GeneTreeiENSGT00390000009902.
HOGENOMiHOG000202112.
HOVERGENiHBG059454.

Family and domain databases

CDDicd12281. RRM1_TatSF1_like. 1 hit.
InterProiView protein in InterPro
IPR000504. RRM_dom.
IPR034393. TatSF1-like.
IPR034392. TatSF1-like_RRM1.
PANTHERiPTHR15608:SF1. PTHR15608:SF1. 1 hit.
PfamiView protein in Pfam
PF00076. RRM_1. 1 hit.
SMARTiView protein in SMART
SM00360. RRM. 1 hit.
SUPFAMiSSF54928. SSF54928. 1 hit.
PROSITEiView protein in PROSITE
PS50102. RRM. 1 hit.

Sequencei

Sequence statusi: Fragment.

Q5H918-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGTNLDGND EFDEQLRMQE LYGDGKDGDT QTDAGGEPDS LGQQPTDTPY
60 70 80 90 100
EWDLDKKAWF PKITEDFIAT YQANYGFSND GASSSTANVE DVHARTAEEP
110 120 130 140 150
PQEKAPEPTD ARKKGEKRKA ESGWFHVEED RNTNVYVSGL PPDITVDEFI
160 170 180 190 200
QLMSKFGIIM RDPQTEEFKV KLYKDNQGNL KGDGLCCYLK RESVELALKL
210 220 230 240
LDEDEIRGYK LHVEVAKFQL KGEYDASKKK KKCKDYKKKL SMQQ
Length:244
Mass (Da):27,744
Last modified:February 15, 2005 - v1
Checksum:i7FFF9D789B0141E9
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei244Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z97632 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000448450; ENSP00000411381; ENSG00000102241.
UCSCiuc065bhx.1. human.

Similar proteinsi

Entry informationi

Entry nameiQ5H918_HUMAN
AccessioniPrimary (citable) accession number: Q5H918
Entry historyiIntegrated into UniProtKB/TrEMBL: February 15, 2005
Last sequence update: February 15, 2005
Last modified: September 27, 2017
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported