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Q5H6Q4 (GLGA_XANOR) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:XOO0112
OrganismXanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85) [Complete proteome] [HAMAP]
Taxonomic identifier291331 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas

Protein attributes

Sequence length509 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Sequence caution

The sequence AAW73366.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 509509Glycogen synthase HAMAP-Rule MF_00484
PRO_0000230274

Sites

Binding site471ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
Q5H6Q4 [UniParc].

Last modified April 4, 2006. Version 2.
Checksum: 0B1DFE3538924A7C

FASTA50954,806
        10         20         30         40         50         60 
MLPALKKGGR PRDALGRFIR HHERLPVSLA DTRGVLFVVS EMADFIKAGG LGDVAAALPR 

        70         80         90        100        110        120 
ALRHRYDVRV LIPGYRAVLE RAGKVEIVGR VLAHAALPAC DIGRIVQSDG LPIYILLSRE 

       130        140        150        160        170        180 
LFERDGSPYV STSGSEFEDN AIRFATLSHA AADIAAGHAG LGWKPRLLHL NDWPCALAAG 

       190        200        210        220        230        240 
YVRWSGGTTP CLLTIHNLAY QGLVPYSMAG ALGIPAERVA ELEFYGQMSF LRGGIVNADH 

       250        260        270        280        290        300 
VNTVSVSYAK QITGPAQGCG LDRLLAGRAA KGALTGIVNG IDASWDPRTD EYLDSHFSVN 

       310        320        330        340        350        360 
QWQGRQDNAA QVRKAFGLRE STGPLFAVVS RLVHQKGLDL ICEVAPQIVA AGGQIAVIGG 

       370        380        390        400        410        420 
GEPDIERQVA ELTRRYPGQV GAFIGFEEGL ARRMFAGADF LLMPSRFEPC GLSQMYAQRF 

       430        440        450        460        470        480 
GCLPIAHATG GLIDTVDDGV TGFLFQHASV EALRRCLERA FRTFRLPGLL AAMRRAAMLR 

       490        500 
PSGWDVAGNK YLSLYERTAA IAPALATVS 

« Hide

References

[1]"The genome sequence of Xanthomonas oryzae pathovar oryzae KACC10331, the bacterial blight pathogen of rice."
Lee B.-M., Park Y.-J., Park D.-S., Kang H.-W., Kim J.-G., Song E.-S., Park I.-C., Yoon U.-H., Hahn J.-H., Koo B.-S., Lee G.-B., Kim H., Park H.-S., Yoon K.-O., Kim J.-H., Jung C.-H., Koh N.-H., Seo J.-S., Go S.-J.
Nucleic Acids Res. 33:577-586(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: KACC10331 / KXO85.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE013598 Genomic DNA. Translation: AAW73366.1. Different initiation.

3D structure databases

ProteinModelPortalQ5H6Q4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING291331.XOO0112.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAW73366; AAW73366; XOO0112.
PATRIC24098913. VBIXanOry111333_0118.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294941.
OMAVHCNDWQ.
OrthoDBEOG6JTC6Z.
ProtClustDBPRK00654.

Enzyme and pathway databases

BioCycXORY291331:GJBV-103-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_XANOR
AccessionPrimary (citable) accession number: Q5H6Q4
Entry history
Integrated into UniProtKB/Swiss-Prot: April 4, 2006
Last sequence update: April 4, 2006
Last modified: February 19, 2014
This is version 53 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways