Q5H6Q4 (GLGA_XANOR) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Glycogen synthase
EC=2.4.1.21

Alternative name(s):
Starch [bacterial glycogen] synthase

Gene names

Name:	glgA
Ordered Locus Names:	XOO0112

Organism

Xanthomonas oryzae pv. oryzae [Complete proteome] [HAMAP]

Taxonomic identifier

64187 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xanthomonas

Protein attributes

Sequence length	509 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Synthesizes alpha-1,4-glucan chains using ADP-glucose. HAMAP MF_00484
Catalytic activity	ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP MF_00484
Pathway	Glycan biosynthesis; glycogen biosynthesis. HAMAP MF_00484
Sequence similarities	Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
Sequence caution	The sequence AAW73366.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
Biological process	Glycogen biosynthesis
Molecular function	Glycosyltransferase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycogen biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	starch synthase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 509	509	Glycogen synthase HAMAP MF_00484		PRO_0000230274
Sites
	Binding site	47	1	ADP-glucose By similarity

Sequences

	Sequence		Length	Mass (Da)
	Q5H6Q4 [UniParc]. Last modified April 4, 2006. Version 2. Checksum: 0B1DFE3538924A7C	FASTA	509	54,806
	10 20 30 40 50 60 MLPALKKGGR PRDALGRFIR HHERLPVSLA DTRGVLFVVS EMADFIKAGG LGDVAAALPR 70 80 90 100 110 120 ALRHRYDVRV LIPGYRAVLE RAGKVEIVGR VLAHAALPAC DIGRIVQSDG LPIYILLSRE 130 140 150 160 170 180 LFERDGSPYV STSGSEFEDN AIRFATLSHA AADIAAGHAG LGWKPRLLHL NDWPCALAAG 190 200 210 220 230 240 YVRWSGGTTP CLLTIHNLAY QGLVPYSMAG ALGIPAERVA ELEFYGQMSF LRGGIVNADH 250 260 270 280 290 300 VNTVSVSYAK QITGPAQGCG LDRLLAGRAA KGALTGIVNG IDASWDPRTD EYLDSHFSVN 310 320 330 340 350 360 QWQGRQDNAA QVRKAFGLRE STGPLFAVVS RLVHQKGLDL ICEVAPQIVA AGGQIAVIGG 370 380 390 400 410 420 GEPDIERQVA ELTRRYPGQV GAFIGFEEGL ARRMFAGADF LLMPSRFEPC GLSQMYAQRF 430 440 450 460 470 480 GCLPIAHATG GLIDTVDDGV TGFLFQHASV EALRRCLERA FRTFRLPGLL AAMRRAAMLR 490 500 PSGWDVAGNK YLSLYERTAA IAPALATVS

References

[1]

"The genome sequence of Xanthomonas oryzae pathovar oryzae KACC10331, the bacterial blight pathogen of rice." Lee B.-M., Park Y.-J., Park D.-S., Kang H.-W., Kim J.-G., Song E.-S., Park I.-C., Yoon U.-H., Hahn J.-H., Koo B.-S., Lee G.-B., Kim H., Park H.-S., Yoon K.-O., Kim J.-H., Jung C.-H., Koh N.-H., Seo J.-S., Go S.-J. Nucleic Acids Res. 33:577-586(2005) [PubMed: 15673718] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: KACC10331 / KXO85.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE013598 Genomic DNA. Translation: AAW73366.1. Different initiation.
RefSeq	YP_198751.6. NC_006834.1.
3D structure databases
ProteinModelPortal	Q5H6Q4.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3265707.
GenomeReviews	Gene locus XOO0112 in contig AE013598_GR.
KEGG	xoo:XOO0112.
NMPDR	fig|291331.3.peg.429.
PATRIC	24098913. VBIXanOry111333_0118.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG596384.
OMA	HAHDWPA.
ProtClustDB	PRK00654.
Enzyme and pathway databases
BioCyc	XORY291331:XOO0112-MONOMER.
Family and domain databases
HAMAP	MF_00484. Glycogen_synth. [Tree]
InterPro	IPR001296. Glyco_trans_1. IPR011835. Glycogen/starch_synth. IPR013534. Starch_synth_cat_dom. [Graphical view]
KO	K00703.
Pfam	PF08323. Glyco_transf_5. 1 hit. PF00534. Glycos_transf_1. 1 hit. [Graphical view]
TIGRFAMs	TIGR02095. GlgA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

GLGA_XANOR

Accession

Primary (citable) accession number: Q5H6Q4

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 4, 2006
Last sequence update:	April 4, 2006
Last modified:	January 25, 2012
This is version 37 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program