Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q5H6Q3

- GLGB2_XANOR

UniProt

Q5H6Q3 - GLGB2_XANOR

Protein

1,4-alpha-glucan branching enzyme GlgB 2

Gene

glgB2

Organism
Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 73 (01 Oct 2014)
      Sequence version 2 (10 May 2005)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

    Catalytic activityi

    Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei398 – 3981NucleophileUniRule annotation
    Active sitei451 – 4511Proton donorUniRule annotation

    GO - Molecular functioni

    1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
    2. cation binding Source: InterPro
    3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

    GO - Biological processi

    1. glycogen biosynthetic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Keywords - Biological processi

    Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

    Enzyme and pathway databases

    BioCyciXORY291331:GJBV-104-MONOMER.
    UniPathwayiUPA00164.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    1,4-alpha-glucan branching enzyme GlgB 2UniRule annotation (EC:2.4.1.18UniRule annotation)
    Alternative name(s):
    1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase 2UniRule annotation
    Alpha-(1->4)-glucan branching enzyme 2UniRule annotation
    Glycogen branching enzyme 2UniRule annotation
    Short name:
    BE 2UniRule annotation
    Gene namesi
    Name:glgB2UniRule annotation
    Ordered Locus Names:XOO0113
    OrganismiXanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85)
    Taxonomic identifieri291331 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
    ProteomesiUP000006735: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 7207201,4-alpha-glucan branching enzyme GlgB 2PRO_0000188769Add
    BLAST

    Interactioni

    Subunit structurei

    Monomer.UniRule annotation

    Protein-protein interaction databases

    STRINGi291331.XOO0113.

    Structurei

    3D structure databases

    ProteinModelPortaliQ5H6Q3.
    SMRiQ5H6Q3. Positions 115-720.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0296.
    HOGENOMiHOG000283037.
    OMAiALEWIEH.
    OrthoDBiEOG6JX7GT.

    Family and domain databases

    Gene3Di2.60.40.10. 2 hits.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    HAMAPiMF_00685. GlgB.
    InterProiIPR006048. A-amylase_b_C.
    IPR006407. GlgB.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR004193. Glyco_hydro_13_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF02922. CBM_48. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000463. GlgB. 1 hit.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    SSF81296. SSF81296. 1 hit.
    TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q5H6Q3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSQTLQALAD GLPVDAFAVL GPHPLADGRR QVRVLAPGAE AMGLIDSRGK    50
    LLARMQASAI DGVFEGILSI EGPYRLRIVW PDMVQEIEDP YAFAVTLDES 100
    LLLQIAAGDG QALRRALGAQ HVQCGEVPGV RFAVWAPHAQ RVAVVGDFNG 150
    WDVRRHPMRQ RIGGFWELFL PRVEAGPRYK YAVTAADGRV LLKADPVARQ 200
    TELPPATASV VPGTDTFAWT DAAWMAKRDP SAVPAPLSIY EVHAASWRRD 250
    GHNQPLDWPT LAEQLIPYVQ QLRFTHIELL PITEHPFGGS WGYQPLGLYA 300
    PTARHGSPDG FAQFVDACHR AGIGVILDWV SAHFPDDAHG LAQFDGAALY 350
    EHADPREGMH RDWNTLIYNY GRPEVTAYLL GSALEWIDHY HLDGLRVDAV 400
    ASMLYRDYGR AEGEWVPNAH GGRENLEAVA FLRQLNREIA AHFPGVLTIA 450
    EESTAWPGVT AAISDGGLGF THKWNMGWMH DTLSYMQRDP AERAHHHSQL 500
    TFGLVYAFDE RFVLPISHDE VVHGTGGLLG QMPGDDWRRF ANLRAYLALM 550
    WAHPGDKLLF MGAEFGQWAD WNHDQSLDWH LLEGARHRGV QLLVGDLNAT 600
    LRRTPALYRG THRAKGFDWS VADDARNSVL AFIRHDPDGG GVPLLAVSNL 650
    TAQPLHDYGV GVPRAGAWRE ILNTDSAHYG GSNLGNSGRL ATEPMGMHGH 700
    AQRLRLTLPP LATIYLQAEK 720
    Length:720
    Mass (Da):79,509
    Last modified:May 10, 2005 - v2
    Checksum:i1890F5F66BAE82D1
    GO

    Sequence cautioni

    The sequence AAW73367.1 differs from that shown. Reason: Erroneous initiation.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE013598 Genomic DNA. Translation: AAW73367.1. Different initiation.

    Genome annotation databases

    EnsemblBacteriaiAAW73367; AAW73367; XOO0113.
    PATRICi24098915. VBIXanOry111333_0119.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE013598 Genomic DNA. Translation: AAW73367.1 . Different initiation.

    3D structure databases

    ProteinModelPortali Q5H6Q3.
    SMRi Q5H6Q3. Positions 115-720.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 291331.XOO0113.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAW73367 ; AAW73367 ; XOO0113 .
    PATRICi 24098915. VBIXanOry111333_0119.

    Phylogenomic databases

    eggNOGi COG0296.
    HOGENOMi HOG000283037.
    OMAi ALEWIEH.
    OrthoDBi EOG6JX7GT.

    Enzyme and pathway databases

    UniPathwayi UPA00164 .
    BioCyci XORY291331:GJBV-104-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.10. 2 hits.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    HAMAPi MF_00685. GlgB.
    InterProi IPR006048. A-amylase_b_C.
    IPR006407. GlgB.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR004193. Glyco_hydro_13_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF02922. CBM_48. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000463. GlgB. 1 hit.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    SSF81296. SSF81296. 1 hit.
    TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: KACC10331 / KXO85.

    Entry informationi

    Entry nameiGLGB2_XANOR
    AccessioniPrimary (citable) accession number: Q5H6Q3
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 10, 2005
    Last sequence update: May 10, 2005
    Last modified: October 1, 2014
    This is version 73 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3