Q5H523 (Q5H523_XANOR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
D-amino acid dehydrogenase small subunit HAMAP MF_01202
EC=1.4.99.1 HAMAP MF_01202

Gene names

Name:	dadA HAMAP MF_01202 EMBL AAW73947.1
Ordered Locus Names:	XOO0693

Organism

Xanthomonas oryzae pv. oryzae [Complete proteome] [HAMAP]

Taxonomic identifier

64187 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xanthomonas

Protein attributes

Sequence length	441 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Oxidative deamination of D-amino acids By similarity. HAMAP MF_01202 SAAS SAAS023080
Catalytic activity	A D-amino acid + H2O + acceptor = a 2-oxo acid + NH3 + reduced acceptor. HAMAP MF_01202 SAAS SAAS023080
Cofactor	FAD By similarity. HAMAP MF_01202 SAAS SAAS023080
Pathway	Amino-acid degradation; D-alanine degradation; NH(3) and pyruvate from D-alanine: step 1/1. HAMAP MF_01202
Subunit structure	Heterodimer of a small and a large subunit By similarity. HAMAP MF_01202 SAAS SAAS023080
Sequence similarities	Belongs to the DadA oxidoreductase family. HAMAP MF_01202

Ontologies

Keywords
Ligand	FAD HAMAP MF_01202 SAAS SAAS023080 Flavoprotein HAMAP MF_01202 SAAS SAAS023080
Molecular function	Oxidoreductase HAMAP MF_01202 SAAS SAAS023080
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	alanine catabolic process Inferred from electronic annotation. Source: HAMAP
Molecular function	D-amino-acid dehydrogenase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Regions
	Nucleotide binding	15 – 29	15	FAD By similarity HAMAP MF_01202

Sequences

	Sequence		Length	Mass (Da)
	Q5H523 [UniParc]. Last modified March 1, 2005. Version 1. Checksum: 8AB97004179BED5D	FASTA	441	48,024
	10 20 30 40 50 60 MVVGECPFEE NDMRVLILGS GVIGVTSAWY LAQAGCEVTV VDRQPAAALE TSYANAGQLS 70 80 90 100 110 120 FGYTSPWAAP GVPGKAVKWL FEQHAPLSIR PTRDLRQLAW LSQMLRNCTA ERYAVNKARM 130 140 150 160 170 180 VRMSDYSRDC LNALRAETGI EFEGRQLGTT QLFRTQQQLD AAAQDIEVLA QYGVPYELLS 190 200 210 220 230 240 PAQIAQFEPG LAGGGAQMAG ALRLPEDQTG DCRLFTQRLA ELAAQAGVTF RYGYQIEWLE 250 260 270 280 290 300 HAGGQVTGVQ IDGRIETADR YVLALGSYSA DLLLSLGLHL PVYPLKGYSL TIPIVDAQRA 310 320 330 340 350 360 PTSTVLDESY KIALTRFDDR IRVGGMAEVA GFDMSLNPRR RATLEMVVND LFPGGGDLAQ 370 380 390 400 410 420 AEFWTGLRPA TPDGTPVVGA TPYANLFLNT GHGTLGWTMA CGSGRYLADL MQGRTPEIDT 430 440 DGLDIFRYLS PRSARPQREA A

References

[1]

"The genome sequence of Xanthomonas oryzae pathovar oryzae KACC10331, the bacterial blight pathogen of rice." Lee B.-M., Park Y.-J., Park D.-S., Kang H.-W., Kim J.-G., Song E.-S., Park I.-C., Yoon U.-H., Hahn J.-H., Koo B.-S., Lee G.-B., Kim H., Park H.-S., Yoon K.-O., Kim J.-H., Jung C.-H., Koh N.-H., Seo J.-S., Go S.-J. Nucleic Acids Res. 33:577-586(2005) [PubMed: 15673718] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: KACC10331 / KXO85.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE013598 Genomic DNA. Translation: AAW73947.1.
RefSeq	YP_199332.2. NC_006834.1.
3D structure databases
ProteinModelPortal	Q5H523.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3265971.
GenomeReviews	Gene locus XOO0693 in contig AE013598_GR.
KEGG	xoo:XOO0693.
NMPDR	fig|291331.3.peg.693.
PATRIC	24100259. VBIXanOry111333_0778.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG729204.
OMA	LEHAGGQ.
ProtClustDB	PRK00711.
Enzyme and pathway databases
BioCyc	XORY291331:XOO0693-MONOMER.
Family and domain databases
HAMAP	MF_01202. DadA. [Tree]
InterPro	IPR023080. D-aa_DH_ssu_DadA. IPR006076. FAD-dep_OxRdtase. [Graphical view]
KO	K00285.
Pfam	PF01266. DAO. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q5H523_XANOR

Accession

Primary (citable) accession number: Q5H523

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2005
Last sequence update:	March 1, 2005
Last modified:	December 14, 2011
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)