Q5GRQ2 (RS20_WOLTR) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
30S ribosomal protein S20

Gene names

Name:	rpsT
Ordered Locus Names:	Wbm0734

Organism

Wolbachia sp. subsp. Brugia malayi (strain TRS) [Complete proteome] [HAMAP]

Taxonomic identifier

292805 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Anaplasmataceae › Wolbachieae › Wolbachia

Protein attributes

Sequence length	89 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds directly to 16S ribosomal RNA By similarity. HAMAP MF_00500
Sequence similarities	Belongs to the ribosomal protein S20P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 89	89	30S ribosomal protein S20 HAMAP MF_00500		PRO_0000224992

Sequences

	Sequence		Length	Mass (Da)
	Q5GRQ2 [UniParc]. Last modified March 1, 2005. Version 1. Checksum: B6034AE0783CFA22	FASTA	89	9,979
	10 20 30 40 50 60 MVNHKNVKKM IKAIAKRTLI NKMRKSKTRT AIRKLVDIIK SGNKENVTPA FRSAESNLHK 70 80 CVSKGVIHKN TAARKISRLN AKVKALMTA

References

[1]

"The Wolbachia genome of Brugia malayi: endosymbiont evolution within a human pathogenic nematode." Foster J., Ganatra M., Kamal I., Ware J., Makarova K., Ivanova N., Bhattacharyya A., Kapatral V., Kumar S., Posfai J., Vincze T., Ingram J., Moran L., Lapidus A., Omelchenko M., Kyrpides N., Ghedin E., Wang S. , Goltsman E., Joukov V., Ostrovskaya O., Tsukerman K., Mazur M., Comb D., Koonin E., Slatko B. PLoS Biol. 3:599-614(2005) [PubMed: 15780005] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: TRS.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE017321 Genomic DNA. Translation: AAW71322.1.
RefSeq	YP_198564.1. NC_006833.1.
3D structure databases
ProteinModelPortal	Q5GRQ2.
ModBase	Search...
Protein-protein interaction databases
STRING	Q5GRQ2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBWOLT00000003470; EBWOLP00000003165; EBWOLG00000003470.
GeneID	3266291.
GenomeReviews	Gene locus Wbm0734 in contig AE017321_GR.
KEGG	wbm:Wbm0734.
PATRIC	24033695. VBIWolEnd7741_1201.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0268.
GeneTree	EBGT00050000031451.
HOGENOM	HBG734145.
OMA	KVKALMT.
ProtClustDB	PRK00239.
Enzyme and pathway databases
BioCyc	WPIP80849:WBM0734-MONOMER.
Family and domain databases
HAMAP	MF_00500. Ribosomal_S20. [Tree]
InterPro	IPR002583. Ribosomal_S20. [Graphical view]
Gene3D	G3DSA:1.20.58.110. Ribosomal_S20. 1 hit.
KO	K02968.
Pfam	PF01649. Ribosomal_S20p. 1 hit. [Graphical view]
ProDom	PD004231. Ribosomal_S20. 1 hit. [Graphical view] [Entries sharing at least one domain]
SUPFAM	SSF46992. Ribosomal_S20p. 1 hit.
TIGRFAMs	TIGR00029. S20. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RS20_WOLTR

Accession

Primary (citable) accession number: Q5GRQ2

Entry history

Integrated into UniProtKB/Swiss-Prot:	March 7, 2006
Last sequence update:	March 1, 2005
Last modified:	January 25, 2012
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program