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Protein

XK-related protein 2

Gene

Xkrx

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
XK-related protein 2
Alternative name(s):
X Kell blood group-related, X-linked
Gene namesi
Name:Xkrx
Synonyms:Xkr2, Xrg2
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome X

Organism-specific databases

MGIiMGI:3584011. Xkrx.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei35 – 5521HelicalSequence analysisAdd
BLAST
Transmembranei68 – 8821HelicalSequence analysisAdd
BLAST
Transmembranei98 – 11821HelicalSequence analysisAdd
BLAST
Transmembranei174 – 19421HelicalSequence analysisAdd
BLAST
Transmembranei204 – 22421HelicalSequence analysisAdd
BLAST
Transmembranei241 – 26121HelicalSequence analysisAdd
BLAST
Transmembranei269 – 28921HelicalSequence analysisAdd
BLAST
Transmembranei306 – 32621HelicalSequence analysisAdd
BLAST
Transmembranei357 – 37721HelicalSequence analysisAdd
BLAST
Transmembranei382 – 40221HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 449449XK-related protein 2PRO_0000190773Add
BLAST

Proteomic databases

EPDiQ5GH68.
PaxDbiQ5GH68.
PRIDEiQ5GH68.

PTM databases

PhosphoSiteiQ5GH68.

Expressioni

Gene expression databases

BgeeiQ5GH68.
CleanExiMM_XKRX.
GenevisibleiQ5GH68. MM.

Family & Domainsi

Sequence similaritiesi

Belongs to the XK family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG410IJ21. Eukaryota.
ENOG4110US3. LUCA.
GeneTreeiENSGT00390000003231.
HOGENOMiHOG000118070.
HOVERGENiHBG055838.
InParanoidiQ5GH68.
OMAiTYQLYVT.
OrthoDBiEOG7034H1.
PhylomeDBiQ5GH68.
TreeFamiTF331465.

Family and domain databases

InterProiIPR018629. XK_fam.
[Graphical view]
PfamiPF09815. XK-related. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5GH68-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDRVYEIPEE PNVVPISSLE EDVIRGPNPR FTFPFSILFS TFLYCGEAAS
60 70 80 90 100
ALYMVRIYRK NNETFWMTYT FSFFMFSSIM VQLTLIFVHR DLAKDRPLSL
110 120 130 140 150
FMHLILLGPV IRCLEAMIKY LTLWKKEGQE EPYVSLTRKK MLIAGQEVLI
160 170 180 190 200
EWEVGHSIRT LAMHRNAYKR MSQIQAFLGS VPQLTYQLYV SLISAEVPLG
210 220 230 240 250
RAVLMAFSLI SVTYGATLCN MLAIQIKYDD YKIRLGPLEV LCITVWRTLE
260 270 280 290 300
ITSRLVILVL FSATLKLKAV PFLVLNFLII LFEPWVKFWR SGAQMPNNIE
310 320 330 340 350
KNFSRVGTLV VLISVTILYA GINFSCWSAM QLKLADRDLV DKGQNWGHMG
360 370 380 390 400
LHYSVRLVEN VIMVLVFKYF GVKVLLNYCH SLIAVQLIIA YLISIGVMLL
410 420 430 440
FFQYLHPLRS LFTNNVVDYL HCICCRRPRP ERVENSETSC EADTTQSIV
Length:449
Mass (Da):51,778
Last modified:March 1, 2005 - v1
Checksum:i0FD7BFCDE2A87EF7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY534249 mRNA. Translation: AAT07098.1.
AL671915 Genomic DNA. Translation: CAM16735.1.
BC150896 mRNA. Translation: AAI50897.1.
BC150897 mRNA. Translation: AAI50898.1.
CCDSiCCDS30391.1.
RefSeqiNP_899142.2. NM_183319.2.
UniGeneiMm.235055.

Genome annotation databases

EnsembliENSMUST00000033611; ENSMUSP00000033611; ENSMUSG00000031258.
GeneIDi331524.
KEGGimmu:331524.
UCSCiuc009ufo.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY534249 mRNA. Translation: AAT07098.1.
AL671915 Genomic DNA. Translation: CAM16735.1.
BC150896 mRNA. Translation: AAI50897.1.
BC150897 mRNA. Translation: AAI50898.1.
CCDSiCCDS30391.1.
RefSeqiNP_899142.2. NM_183319.2.
UniGeneiMm.235055.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

PTM databases

PhosphoSiteiQ5GH68.

Proteomic databases

EPDiQ5GH68.
PaxDbiQ5GH68.
PRIDEiQ5GH68.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000033611; ENSMUSP00000033611; ENSMUSG00000031258.
GeneIDi331524.
KEGGimmu:331524.
UCSCiuc009ufo.1. mouse.

Organism-specific databases

CTDi402415.
MGIiMGI:3584011. Xkrx.

Phylogenomic databases

eggNOGiENOG410IJ21. Eukaryota.
ENOG4110US3. LUCA.
GeneTreeiENSGT00390000003231.
HOGENOMiHOG000118070.
HOVERGENiHBG055838.
InParanoidiQ5GH68.
OMAiTYQLYVT.
OrthoDBiEOG7034H1.
PhylomeDBiQ5GH68.
TreeFamiTF331465.

Miscellaneous databases

NextBioi399806.
PROiQ5GH68.
SOURCEiSearch...

Gene expression databases

BgeeiQ5GH68.
CleanExiMM_XKRX.
GenevisibleiQ5GH68. MM.

Family and domain databases

InterProiIPR018629. XK_fam.
[Graphical view]
PfamiPF09815. XK-related. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "A superfamily of XK-related genes (XRG) widely expressed in vertebrates and invertebrates."
    Huang C.-H., Chen Y.
    Submitted (JAN-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: C57BL/6J.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6J.
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Brain.

Entry informationi

Entry nameiXKR2_MOUSE
AccessioniPrimary (citable) accession number: Q5GH68
Secondary accession number(s): A2AEK6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2005
Last sequence update: March 1, 2005
Last modified: March 16, 2016
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.