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Protein

XK-related protein 2

Gene

Xkrx

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
XK-related protein 2
Alternative name(s):
X Kell blood group-related, X-linked
Gene namesi
Name:Xkrx
Synonyms:Xkr2, Xrg2
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome X

Organism-specific databases

RGDi1359223. Xkrx.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei34 – 54HelicalSequence analysisAdd BLAST21
Transmembranei67 – 87HelicalSequence analysisAdd BLAST21
Transmembranei97 – 117HelicalSequence analysisAdd BLAST21
Transmembranei173 – 193HelicalSequence analysisAdd BLAST21
Transmembranei203 – 223HelicalSequence analysisAdd BLAST21
Transmembranei268 – 288HelicalSequence analysisAdd BLAST21
Transmembranei305 – 325HelicalSequence analysisAdd BLAST21
Transmembranei356 – 376HelicalSequence analysisAdd BLAST21
Transmembranei381 – 401HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001907741 – 448XK-related protein 2Add BLAST448

Proteomic databases

PaxDbiQ5GH60.
PRIDEiQ5GH60.

Expressioni

Gene expression databases

BgeeiENSRNOG00000026961.
GenevisibleiQ5GH60. RN.

Structurei

3D structure databases

ProteinModelPortaliQ5GH60.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the XK family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG410IJ21. Eukaryota.
ENOG4110US3. LUCA.
GeneTreeiENSGT00390000003231.
HOGENOMiHOG000118070.
HOVERGENiHBG055838.
InParanoidiQ5GH60.
OMAiGQEEPYV.
OrthoDBiEOG091G07Y7.
PhylomeDBiQ5GH60.
TreeFamiTF331465.

Family and domain databases

InterProiIPR018629. XK_rel.
[Graphical view]
PfamiPF09815. XK-related. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5GH60-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDRVYEIPEE PNVVPIASLE DVIRGPNPRF TFPFSILFST FLYCGEAASA
60 70 80 90 100
LYMVRIYRKN NETFWMTYTF SFFMFSSIMV QLTLIFVHRD LAKDRPLSLF
110 120 130 140 150
MHLILLGPVI RCLEAMIKYL TLWKKEGQEE PYVSLTRKKM LIDGQEVLIE
160 170 180 190 200
WEVGHSIRTL AMHRNAYKRM SQIQAFLGSV PQLTYQLYVT LISAEVPLGR
210 220 230 240 250
AVLMFFSLIS VTYGATLCNM LAIQIKYDDY KIRLGPVEVL CITIWRTLEI
260 270 280 290 300
TSRLMILVLF SATLKLKAVP FLVLNFLIIL FEPWVKFWRS GAQMPNNIEK
310 320 330 340 350
NFSRVGTLVV LISVTILYAG INFSCWSAMQ LKLADRDLVD KGQNWGHMGL
360 370 380 390 400
HYSVRLVENV IMVLVFKYFG VKVLLNYSHS LMAIQLIIAY LISIGFMLLF
410 420 430 440
FQYLHPLRSL FTHNVVDYLH CICCRRHHRE RVENSETSCE PDTRQSIV
Length:448
Mass (Da):52,048
Last modified:March 1, 2005 - v1
Checksum:i38F93DE2B9631ACA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY534257 mRNA. Translation: AAT07106.1.
RefSeqiNP_001012230.1. NM_001012230.1.
UniGeneiRn.137020.

Genome annotation databases

EnsembliENSRNOT00000077996; ENSRNOP00000070278; ENSRNOG00000054136.
GeneIDi497101.
KEGGirno:497101.
UCSCiRGD:1359223. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY534257 mRNA. Translation: AAT07106.1.
RefSeqiNP_001012230.1. NM_001012230.1.
UniGeneiRn.137020.

3D structure databases

ProteinModelPortaliQ5GH60.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PaxDbiQ5GH60.
PRIDEiQ5GH60.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000077996; ENSRNOP00000070278; ENSRNOG00000054136.
GeneIDi497101.
KEGGirno:497101.
UCSCiRGD:1359223. rat.

Organism-specific databases

CTDi402415.
RGDi1359223. Xkrx.

Phylogenomic databases

eggNOGiENOG410IJ21. Eukaryota.
ENOG4110US3. LUCA.
GeneTreeiENSGT00390000003231.
HOGENOMiHOG000118070.
HOVERGENiHBG055838.
InParanoidiQ5GH60.
OMAiGQEEPYV.
OrthoDBiEOG091G07Y7.
PhylomeDBiQ5GH60.
TreeFamiTF331465.

Miscellaneous databases

PROiQ5GH60.

Gene expression databases

BgeeiENSRNOG00000026961.
GenevisibleiQ5GH60. RN.

Family and domain databases

InterProiIPR018629. XK_rel.
[Graphical view]
PfamiPF09815. XK-related. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiXKR2_RAT
AccessioniPrimary (citable) accession number: Q5GH60
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2005
Last sequence update: March 1, 2005
Last modified: November 2, 2016
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.