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Q5GAM7 (RNS13_MOUSE) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Probable inactive ribonuclease-like protein 13
Gene names
Name:Rnase13
OrganismMus musculus (Mouse) [Reference proteome]
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length153 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

Does not exhibit any ribonuclease activity Potential.

Subcellular location

Secreted Probable.

Sequence similarities

Belongs to the pancreatic ribonuclease family.

Ontologies

Keywords
   Cellular componentSecreted
   DomainSignal
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentextracellular region

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionendoribonuclease activity, producing 3'-phosphomonoesters

Inferred from electronic annotation. Source: InterPro

nucleic acid binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2222 Potential
Chain23 – 153131Probable inactive ribonuclease-like protein 13
PRO_0000308706

Sequences

Sequence LengthMass (Da)Tools
Q5GAM7 [UniParc].

Last modified March 1, 2005. Version 1.
Checksum: AE5215027F005AC8

FASTA15317,592
        10         20         30         40         50         60 
MAPDVAWLLV LPLVFRPTLV TGITIQTAIK NFRTLHVDYP MVNYPKGFHG YCNGLMAYVR 

        70         80         90        100        110        120 
GKLQDWYCPK IHYVVHAPLE DIQKFCKYSE SFCENYNEYC TLTQNSFPVT ICTLVHQQAP 

       130        140        150 
TSCSYNSTLT NQRLYLLCSR KHDAEPIGII GLY 

« Hide

References

« Hide 'large scale' references
[1]"The ribonuclease A superfamily of mammals and birds: identifying new members and tracing evolutionary histories."
Cho S., Beintema J.J., Zhang J.
Genomics 85:208-220(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: C57BL/6J.
[2]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Brain.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY665825 Genomic DNA. Translation: AAV87192.1.
BC132614 mRNA. Translation: AAI32615.1.
BC132616 mRNA. Translation: AAI32617.1.
CCDSCCDS27048.1.
RefSeqNP_001011687.1. NM_001011687.2.
XP_006519281.1. XM_006519218.1.
XP_006519282.1. XM_006519219.1.
XP_006534720.1. XM_006534657.1.
XP_006534721.1. XM_006534658.1.
UniGeneMm.378602.

3D structure databases

ProteinModelPortalQ5GAM7.
SMRQ5GAM7. Positions 25-140.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING10090.ENSMUSP00000087203.

PTM databases

PhosphoSiteQ5GAM7.

Proteomic databases

PRIDEQ5GAM7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000089771; ENSMUSP00000087203; ENSMUSG00000068392.
GeneID497071.
KEGGmmu:497071.
UCSCuc007tnn.2. mouse.

Organism-specific databases

CTD440163.
MGIMGI:3528592. Rnase13.

Phylogenomic databases

eggNOGNOG80038.
GeneTreeENSGT00390000015830.
HOGENOMHOG000008687.
HOVERGENHBG095659.
InParanoidQ5GAM7.
OMARLYLLCS.
OrthoDBEOG78H3VP.
PhylomeDBQ5GAM7.
TreeFamTF343810.

Gene expression databases

CleanExMM_RNASE13.
GenevestigatorQ5GAM7.

Family and domain databases

Gene3D3.10.130.10. 1 hit.
InterProIPR001427. RNaseA.
IPR023412. RNaseA_domain.
[Graphical view]
PANTHERPTHR11437. PTHR11437. 1 hit.
PfamPF00074. RnaseA. 1 hit.
[Graphical view]
ProDomPD000535. RNaseA. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMSSF54076. SSF54076. 1 hit.
ProtoNetSearch...

Other

NextBio411776.
PROQ5GAM7.
SOURCESearch...

Entry information

Entry nameRNS13_MOUSE
AccessionPrimary (citable) accession number: Q5GAM7
Entry history
Integrated into UniProtKB/Swiss-Prot: October 23, 2007
Last sequence update: March 1, 2005
Last modified: July 9, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

MGD cross-references

Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot