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Q5GAM7

- RNS13_MOUSE

UniProt

Q5GAM7 - RNS13_MOUSE

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Protein
Probable inactive ribonuclease-like protein 13
Gene
Rnase13
Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Functioni

Does not exhibit any ribonuclease activity Reviewed prediction.

GO - Molecular functioni

  1. endoribonuclease activity, producing 3'-phosphomonoesters Source: InterPro
  2. nucleic acid binding Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Probable inactive ribonuclease-like protein 13
Gene namesi
Name:Rnase13
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 14

Organism-specific databases

MGIiMGI:3528592. Rnase13.

Subcellular locationi

Secreted Inferred

GO - Cellular componenti

  1. extracellular region Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2222 Reviewed prediction
Add
BLAST
Chaini23 – 153131Probable inactive ribonuclease-like protein 13
PRO_0000308706Add
BLAST

Proteomic databases

PRIDEiQ5GAM7.

PTM databases

PhosphoSiteiQ5GAM7.

Expressioni

Gene expression databases

CleanExiMM_RNASE13.
GenevestigatoriQ5GAM7.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000087203.

Structurei

3D structure databases

ProteinModelPortaliQ5GAM7.
SMRiQ5GAM7. Positions 25-140.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiNOG80038.
GeneTreeiENSGT00390000015830.
HOGENOMiHOG000008687.
HOVERGENiHBG095659.
InParanoidiQ5GAM7.
OMAiRLYLLCS.
OrthoDBiEOG78H3VP.
PhylomeDBiQ5GAM7.
TreeFamiTF343810.

Family and domain databases

Gene3Di3.10.130.10. 1 hit.
InterProiIPR001427. RNaseA.
IPR023412. RNaseA_domain.
[Graphical view]
PANTHERiPTHR11437. PTHR11437. 1 hit.
PfamiPF00074. RnaseA. 1 hit.
[Graphical view]
ProDomiPD000535. RNaseA. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF54076. SSF54076. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q5GAM7-1 [UniParc]FASTAAdd to Basket

« Hide

MAPDVAWLLV LPLVFRPTLV TGITIQTAIK NFRTLHVDYP MVNYPKGFHG    50
YCNGLMAYVR GKLQDWYCPK IHYVVHAPLE DIQKFCKYSE SFCENYNEYC 100
TLTQNSFPVT ICTLVHQQAP TSCSYNSTLT NQRLYLLCSR KHDAEPIGII 150
GLY 153
Length:153
Mass (Da):17,592
Last modified:March 1, 2005 - v1
Checksum:iAE5215027F005AC8
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY665825 Genomic DNA. Translation: AAV87192.1.
BC132614 mRNA. Translation: AAI32615.1.
BC132616 mRNA. Translation: AAI32617.1.
CCDSiCCDS27048.1.
RefSeqiNP_001011687.1. NM_001011687.2.
XP_006519281.1. XM_006519218.1.
XP_006519282.1. XM_006519219.1.
XP_006534720.1. XM_006534657.1.
XP_006534721.1. XM_006534658.1.
UniGeneiMm.378602.

Genome annotation databases

EnsembliENSMUST00000089771; ENSMUSP00000087203; ENSMUSG00000068392.
GeneIDi497071.
KEGGimmu:497071.
UCSCiuc007tnn.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY665825 Genomic DNA. Translation: AAV87192.1 .
BC132614 mRNA. Translation: AAI32615.1 .
BC132616 mRNA. Translation: AAI32617.1 .
CCDSi CCDS27048.1.
RefSeqi NP_001011687.1. NM_001011687.2.
XP_006519281.1. XM_006519218.1.
XP_006519282.1. XM_006519219.1.
XP_006534720.1. XM_006534657.1.
XP_006534721.1. XM_006534658.1.
UniGenei Mm.378602.

3D structure databases

ProteinModelPortali Q5GAM7.
SMRi Q5GAM7. Positions 25-140.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 10090.ENSMUSP00000087203.

PTM databases

PhosphoSitei Q5GAM7.

Proteomic databases

PRIDEi Q5GAM7.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000089771 ; ENSMUSP00000087203 ; ENSMUSG00000068392 .
GeneIDi 497071.
KEGGi mmu:497071.
UCSCi uc007tnn.2. mouse.

Organism-specific databases

CTDi 440163.
MGIi MGI:3528592. Rnase13.

Phylogenomic databases

eggNOGi NOG80038.
GeneTreei ENSGT00390000015830.
HOGENOMi HOG000008687.
HOVERGENi HBG095659.
InParanoidi Q5GAM7.
OMAi RLYLLCS.
OrthoDBi EOG78H3VP.
PhylomeDBi Q5GAM7.
TreeFami TF343810.

Miscellaneous databases

NextBioi 411776.
PROi Q5GAM7.
SOURCEi Search...

Gene expression databases

CleanExi MM_RNASE13.
Genevestigatori Q5GAM7.

Family and domain databases

Gene3Di 3.10.130.10. 1 hit.
InterProi IPR001427. RNaseA.
IPR023412. RNaseA_domain.
[Graphical view ]
PANTHERi PTHR11437. PTHR11437. 1 hit.
Pfami PF00074. RnaseA. 1 hit.
[Graphical view ]
ProDomi PD000535. RNaseA. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
SUPFAMi SSF54076. SSF54076. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The ribonuclease A superfamily of mammals and birds: identifying new members and tracing evolutionary histories."
    Cho S., Beintema J.J., Zhang J.
    Genomics 85:208-220(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: C57BL/6J.
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Brain.

Entry informationi

Entry nameiRNS13_MOUSE
AccessioniPrimary (citable) accession number: Q5GAM7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 23, 2007
Last sequence update: March 1, 2005
Last modified: July 9, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi