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Protein

Plant intracellular Ras-group-related LRR protein 5

Gene

PIRL5

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Leucine-rich repeat protein that likely mediates protein interactions, possibly in the context of signal transduction.By similarity

Names & Taxonomyi

Protein namesi
Recommended name:
Plant intracellular Ras-group-related LRR protein 5
Gene namesi
Name:PIRL5
Ordered Locus Names:At2g17440
ORF Names:F5J6.20
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

TAIRiAT2G17440.

Subcellular locationi

GO - Cellular componenti

  • plasma membrane Source: TAIR
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004236051 – 526Plant intracellular Ras-group-related LRR protein 5Add BLAST526

Proteomic databases

PaxDbiQ5G5E0.

PTM databases

iPTMnetiQ5G5E0.

Expressioni

Tissue specificityi

Widely expressed but preferentially in roots.1 Publication

Gene expression databases

GenevisibleiQ5G5E0. AT.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT2G17440.1.

Structurei

3D structure databases

ProteinModelPortaliQ5G5E0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati229 – 252LRR 1Add BLAST24
Repeati253 – 275LRR 2Add BLAST23
Repeati276 – 297LRR 3Add BLAST22
Repeati298 – 321LRR 4Add BLAST24
Repeati323 – 344LRR 5Add BLAST22
Repeati346 – 367LRR 6Add BLAST22
Repeati368 – 390LRR 7Add BLAST23
Repeati391 – 414LRR 8Add BLAST24
Repeati416 – 437LRR 9Add BLAST22
Repeati438 – 463LRR 10Add BLAST26
Repeati465 – 484LRR 11Add BLAST20

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi485 – 492GVYW; degenerate8

Sequence similaritiesi

Belongs to the SHOC2 family.Curated
Contains 11 LRR (leucine-rich) repeats.Curated

Keywords - Domaini

Leucine-rich repeat, Repeat

Phylogenomic databases

eggNOGiKOG0619. Eukaryota.
COG4886. LUCA.
HOGENOMiHOG000242894.
InParanoidiQ5G5E0.
OMAiARNTKSQ.
OrthoDBiEOG09360854.
PhylomeDBiQ5G5E0.

Family and domain databases

Gene3Di3.80.10.10. 2 hits.
InterProiIPR032675. L_dom-like.
IPR001611. Leu-rich_rpt.
IPR003591. Leu-rich_rpt_typical-subtyp.
[Graphical view]
PfamiPF00560. LRR_1. 1 hit.
PF13855. LRR_8. 3 hits.
[Graphical view]
SMARTiSM00369. LRR_TYP. 9 hits.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 1 hit.
PROSITEiPS51450. LRR. 10 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5G5E0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDSKEMVVEE IMRIHRSLPL RPEIDDVETA TSLIQNVEKE DRNRLEAIDK
60 70 80 90 100
LVKTSSSEVP LELFNVFKEM KKSLVRFQST EQTREATKIL DLESVHVVFD
110 120 130 140 150
ELIQRASFCI ASPNSTTALP RSVPVPAPVV SSDEIPFKSK EIISRDDTFV
160 170 180 190 200
KKAKSSFYSD GLLAPSKPQV LDSTLHQAKN VAGNDGEKLS LIKLASLIEV
210 220 230 240 250
SAKKATQELN LQHRLMDQLE WLPDSLGKLS SLVRLDLSEN CIMVLPATIG
260 270 280 290 300
GLISLTRLDL HSNRIGQLPE SIGDLLNLVN LNLSGNQLSS LPSSFNRLIH
310 320 330 340 350
LEELDLSSNS LSILPESIGS LVSLKKLDVE TNNIEEIPHS ISGCSSMEEL
360 370 380 390 400
RADYNRLKAL PEAVGKLSTL EILTVRYNNI RQLPTTMSSM ANLKELDVSF
410 420 430 440 450
NELESVPESL CYAKTLVKLN IGNNFANLRS LPGLIGNLEK LEELDMSNNQ
460 470 480 490 500
IRFLPYSFKT LSNLRVLQTE QNPLEELPRD ITEKGAQAVV QYMNDLVEAR
510 520
NTKSQRTKPK KSWVNSICFF CKSSTN
Length:526
Mass (Da):58,742
Last modified:September 1, 2009 - v1
Checksum:iA9C2F51847502D08
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY849575 mRNA. Translation: AAW57414.1.
CP002685 Genomic DNA. Translation: AEC06625.1.
AK228738 mRNA. Translation: BAF00638.1.
PIRiC84552.
RefSeqiNP_179336.1. NM_127299.4.
UniGeneiAt.40141.

Genome annotation databases

EnsemblPlantsiAT2G17440.1; AT2G17440.1; AT2G17440.
GeneIDi816250.
GrameneiAT2G17440.1; AT2G17440.1; AT2G17440.
KEGGiath:AT2G17440.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY849575 mRNA. Translation: AAW57414.1.
CP002685 Genomic DNA. Translation: AEC06625.1.
AK228738 mRNA. Translation: BAF00638.1.
PIRiC84552.
RefSeqiNP_179336.1. NM_127299.4.
UniGeneiAt.40141.

3D structure databases

ProteinModelPortaliQ5G5E0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT2G17440.1.

PTM databases

iPTMnetiQ5G5E0.

Proteomic databases

PaxDbiQ5G5E0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT2G17440.1; AT2G17440.1; AT2G17440.
GeneIDi816250.
GrameneiAT2G17440.1; AT2G17440.1; AT2G17440.
KEGGiath:AT2G17440.

Organism-specific databases

TAIRiAT2G17440.

Phylogenomic databases

eggNOGiKOG0619. Eukaryota.
COG4886. LUCA.
HOGENOMiHOG000242894.
InParanoidiQ5G5E0.
OMAiARNTKSQ.
OrthoDBiEOG09360854.
PhylomeDBiQ5G5E0.

Miscellaneous databases

PROiQ5G5E0.

Gene expression databases

GenevisibleiQ5G5E0. AT.

Family and domain databases

Gene3Di3.80.10.10. 2 hits.
InterProiIPR032675. L_dom-like.
IPR001611. Leu-rich_rpt.
IPR003591. Leu-rich_rpt_typical-subtyp.
[Graphical view]
PfamiPF00560. LRR_1. 1 hit.
PF13855. LRR_8. 3 hits.
[Graphical view]
SMARTiSM00369. LRR_TYP. 9 hits.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 1 hit.
PROSITEiPS51450. LRR. 10 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiPIRL5_ARATH
AccessioniPrimary (citable) accession number: Q5G5E0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 16, 2013
Last sequence update: September 1, 2009
Last modified: November 30, 2016
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.