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Q5FWV9

- Q5FWV9_MOUSE

UniProt

Q5FWV9 - Q5FWV9_MOUSE

Protein
Submitted name:

Zbtb7b protein

Gene

Zbtb7b

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 60 (01 Oct 2014)
      Sequence version 1 (01 Mar 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA binding Source: MGI
    2. metal ion binding Source: InterPro
    3. protein homodimerization activity Source: MGI
    4. sequence-specific DNA binding transcription factor activity Source: MGI

    GO - Biological processi

    1. positive regulation of gene expression Source: MGI
    2. positive regulation of transcription from RNA polymerase II promoter Source: MGI
    3. regulation of CD4-positive, alpha-beta T cell differentiation Source: MGI
    4. regulation of CD8-positive, alpha-beta T cell differentiation Source: MGI

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Zbtb7b proteinImported
    Gene namesi
    Name:Zbtb7bImported
    Synonyms:ThpokImported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

    Organism-specific databases

    MGIiMGI:102755. Zbtb7b.

    Expressioni

    Gene expression databases

    GenevestigatoriQ5FWV9.

    Interactioni

    Protein-protein interaction databases

    STRINGi10090.ENSMUSP00000103056.

    Structurei

    3D structure databases

    ProteinModelPortaliQ5FWV9.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000082521.
    HOVERGENiHBG059461.

    Family and domain databases

    Gene3Di3.30.160.60. 3 hits.
    3.30.710.10. 1 hit.
    InterProiIPR011333. BTB/POZ_fold.
    IPR013069. BTB_POZ.
    IPR007087. Znf_C2H2.
    IPR015880. Znf_C2H2-like.
    IPR013087. Znf_C2H2/integrase_DNA-bd.
    [Graphical view]
    PfamiPF00651. BTB. 1 hit.
    [Graphical view]
    SMARTiSM00355. ZnF_C2H2. 3 hits.
    [Graphical view]
    SUPFAMiSSF54695. SSF54695. 1 hit.
    PROSITEiPS00028. ZINC_FINGER_C2H2_1. 3 hits.
    PS50157. ZINC_FINGER_C2H2_2. 3 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    Q5FWV9-1 [UniParc]FASTAAdd to Basket

    « Hide

    EGGGGTVMGT GGGGTASGGA GAGVCELDFV GPEALGALLE FAYTATLTTS    50
    SANMPAVLQA ARLLEIPCVI AACMEILQGS GLEAPSPDED DCERARQYLE 100
    AFATATTTAS TSGMPNGEDS PPQVPLLPPP PPPPRPVARR SRKPRKAFLQ 150
    TKGARANHLV PEAPTVLTHP LTYEEEEMVG RLGNSGGSGL GDSYSPPTGA 200
    ASPAEGPLNY EVFEGEEEEE EMAYPPGYGL AQSNEPSLSP EELGSDEDPI 250
    DPDLMAYLSS LHQDALTPGL DGQDKLVRKR RSQMPQECPV CHKIIHGAGK 300
    LPRHMRTHTG EKPFACEVCG VRFTRNDKLK IHMRKHTGER PYSCPHCPAR 350
    FLHSYDLKNH MHLHTGDHHL IPCWPRPFQW PPGHLPPLSG SILGAVGHHG 400
    TPSHYTRAP 409
    Length:409
    Mass (Da):43,713
    Last modified:March 1, 2005 - v1
    Checksum:iF98B5B3B52C05E2F
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC089185 mRNA. Translation: AAH89185.1.
    UniGeneiMm.262184.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC089185 mRNA. Translation: AAH89185.1 .
    UniGenei Mm.262184.

    3D structure databases

    ProteinModelPortali Q5FWV9.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10090.ENSMUSP00000103056.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    MGIi MGI:102755. Zbtb7b.

    Phylogenomic databases

    HOGENOMi HOG000082521.
    HOVERGENi HBG059461.

    Miscellaneous databases

    ChiTaRSi ZBTB7B. mouse.
    SOURCEi Search...

    Gene expression databases

    Genevestigatori Q5FWV9.

    Family and domain databases

    Gene3Di 3.30.160.60. 3 hits.
    3.30.710.10. 1 hit.
    InterProi IPR011333. BTB/POZ_fold.
    IPR013069. BTB_POZ.
    IPR007087. Znf_C2H2.
    IPR015880. Znf_C2H2-like.
    IPR013087. Znf_C2H2/integrase_DNA-bd.
    [Graphical view ]
    Pfami PF00651. BTB. 1 hit.
    [Graphical view ]
    SMARTi SM00355. ZnF_C2H2. 3 hits.
    [Graphical view ]
    SUPFAMi SSF54695. SSF54695. 1 hit.
    PROSITEi PS00028. ZINC_FINGER_C2H2_1. 3 hits.
    PS50157. ZINC_FINGER_C2H2_2. 3 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
      , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: NMRIImported.
      Tissue: Mammary tumor. WAP-Tag model. 5 months oldImported.

    Entry informationi

    Entry nameiQ5FWV9_MOUSE
    AccessioniPrimary (citable) accession number: Q5FWV9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 1, 2005
    Last sequence update: March 1, 2005
    Last modified: October 1, 2014
    This is version 60 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)