Skip Header

Contribute Send feedback
Read comments (0) or add your own

Unreviewed, UniProtKB/TrEMBL Q5FVS6 (Q5FVS6_RAT)

Last modified February 9, 2010. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Hide | Top

Names and origin

Protein namesSubmitted name:
    Phosphoinositide-3-kinase, regulatory subunit 2 (Beta) EMBL AAH89805.1
Submitted name:
    Phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 2, isoform CRA_a EMBL EDL90737.1
Gene names
Name: Pik3r2 RGD 68341
ORF Names: rCG_38682 EMBL EDL90737.1
OrganismRattus norvegicus (Rat) EMBL AAH89805.1
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Hide | Top

Protein attributes

Sequence length722 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level.

Hide | Top

Sequences

Sequence LengthMass (Da)Tools
Q5FVS6-1 [UniParc].

Last modified March 1, 2005. Version 1.
Checksum: 7D3872BC46F90B1B

FASTA72281,268
        10         20         30         40         50         60 
MAGAEGFQYR AVYPFRRERP EDLELLPGDL LVVSRVALQA LGVADGGERC PHNVGWMPGF 

        70         80         90        100        110        120 
NERTRQRGDF PGTYVEFLGP VALARPGPRP RGPRPLPARP LDGPSESGHT LASLAEQFSP 

       130        140        150        160        170        180 
PEPAPPILVK LIEAIEQAEL DSECYSRPEL PAPRTDWSLS DLEQWDRTTL YDAVKGFLLA 

       190        200        210        220        230        240 
LPAAVVTPEA ASEAYRAMRE VTGPVGLVLE PPTLPLHQAL TLQFLLQHLG RVARRAPSPA 

       250        260        270        280        290        300 
TAVHALASAF GPLLLRAPPP GGEGDGSEPA PDFPVLLLER LVQEHVDEQD TAPPALPPKP 

       310        320        330        340        350        360 
SKVKPAPTAL ANGGSTPSLQ DAEWYWGDIS REEVNERLRD TPDGTFLVRD ASSKIQGEYT 

       370        380        390        400        410        420 
LTLRKGGNNK LIKVFHRDGH YGFSEPLTFC SVVELISHYR HESLAQYNAK LDTRLLYPVS 

       430        440        450        460        470        480 
KYQQDQVVKE DSVEAVGAQL KVYHQQYQDK SREYDQLYEE YTRTSQELQM KRTAIEAFNE 

       490        500        510        520        530        540 
TIKIFEEQGQ TQEKCSKEYL ERFRREGNEK EMQRILLNSE RLKSRIAEIH ESRTKLEQDL 

       550        560        570        580        590        600 
RAQASDNREI DKRMNSLKPD LMQLRKIRDQ YLVWLTQKGA RQRKINEWLG IKNETEDQYS 

       610        620        630        640        650        660 
LMEDEDALPH HEERTWYVGK INRTQAEEML SGKRDGTFLI RESSQRGCYA CSVVVDGDTK 

       670        680        690        700        710        720 
HCVIYRTATG FGFAEPYNLY GSLKELVLHY QHASLVQHND ALTVTLAHPV RAPGPGPPPA 


AR

« Hide

Hide | Top

References

« Hide 'large scale' references
[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Thymus EMBL AAH89805.1.
[2]"Gene and alternative splicing annotation with AIR."
Florea L., Di Francesco V., Miller J., Turner R., Yao A., Harris M., Walenz B., Mobarry C., Merkulov G.V., Charlab R., Dew I., Deng Z., Istrail S., Li P., Sutton G.
Genome Res. 15:54-66(2005) [PubMed: 15632090] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BN EMBL EDL90737.1.
[3]Mural R.J., Li P.W., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S.H., Dew I., Evans C.A., Ferriera S., Flanigan M., Fosler C., Glodek A., Gu Z., Holt R.A., Jennings D., Kraft C.L., Lu F. expand/collapse author list , Nguyen T., Nusskern D.R., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Wang Z., Woodage T., Zheng X.H., Zhong F.
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BN EMBL EDL90737.1.

Hide | Top

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BC089805 mRNA. Translation: AAH89805.1.
CH474031 Genomic DNA. Translation: EDL90737.1.
IPIIPI00554334.
RefSeqNP_071521.2.
UniGeneRn.22497

3D structure databases

SMRQ5FVS6. Positions 7-76, 107-259, 318-430, 422-590, 608-712.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ5FVS6.

Genome annotation databases

EnsemblENSRNOT00000026210; ENSRNOP00000026210; ENSRNOG00000019228; Rattus norvegicus. [Genome view]
GeneID29741.
KEGGrno:29741.
NMPDRfig|10116.3.peg.12208.

Organism-specific databases

CTD29741.

Phylogenomic databases

eggNOGmaNOG04646.
HOVERGENQ5FVS6.
InParanoidQ5FVS6.
OMADEDDLPH.
OrthoDBEOG9HDWCT.
PhylomeDBQ5FVS6.

Gene expression databases

ArrayExpressQ5FVS6.
GenevestigatorQ5FVS6.

Family and domain databases

InterProIPR001720. PI3kinase_P85.
IPR008936. Rho_GTPase_activation_prot.
IPR000198. RhoGAP.
IPR000980. SH2.
IPR001452. SH3_domain.
[Graphical view]
Gene3DG3DSA:1.10.555.10. RhoGAP. 1 hit.
G3DSA:3.30.505.10. SH2. 2 hits.
PANTHERPTHR10155. PI3kinase_P85. 1 hit.
PfamPF00620. RhoGAP. 1 hit.
PF00017. SH2. 2 hits.
[Graphical view]
PRINTSPR00678. PI3KINASEP85.
PR00401. SH2DOMAIN.
SMARTSM00324. RhoGAP. 1 hit.
SM00252. SH2. 2 hits.
SM00326. SH3. 1 hit.
[Graphical view]
PROSITEPS50238. RHOGAP. 1 hit.
PS50001. SH2. 2 hits.
PS50002. SH3. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

NextBio610248.

Hide | Top

Entry information

Entry nameQ5FVS6_RAT
AccessionPrimary (citable) accession number: Q5FVS6
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2005
Last sequence update: March 1, 2005
Last modified: February 9, 2010
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information