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Q5FVQ2

- Q5FVQ2_RAT

UniProt

Q5FVQ2 - Q5FVQ2_RAT

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Protein
Submitted name:

Peter pan homolog (Drosophila)

Gene
Ppan
Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Peter pan homolog (Drosophila)Imported
Submitted name:
Protein PpanImported
Gene namesi
Name:PpanImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 8

Organism-specific databases

RGDi1306325. Ppan.

PTM / Processingi

Proteomic databases

PaxDbiQ5FVQ2.

Expressioni

Gene expression databases

GenevestigatoriQ5FVQ2.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000057914.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG272199.
GeneTreeiENSGT00530000064158.
HOGENOMiHOG000210038.
HOVERGENiHBG026954.
KOiK14859.
OMAiLGVTHLM.
OrthoDBiEOG71G9TZ.

Family and domain databases

InterProiIPR004154. Anticodon-bd.
IPR007109. Brix.
[Graphical view]
PfamiPF04427. Brix. 1 hit.
[Graphical view]
SMARTiSM00879. Brix. 1 hit.
[Graphical view]
SUPFAMiSSF52954. SSF52954. 1 hit.
PROSITEiPS50833. BRIX. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5FVQ2-1 [UniParc]FASTAAdd to Basket

« Hide

MGQSGRSRHQ KRARAQAQLR NLEAYAAQPH SFVFTRGRAG RSVQQLSLDV    50
RRVLEPLTAT RLQVRKKNSL KDCVAVAGPL GVTHFLVLSK TDSSVYLKLM 100
RLPGGPTLTF QINKYTLIRD VVSSLRRHRM HEQQFNHPPL LILNSFGTPG 150
MHVKLMATMF QNLFPSINVH TVNLNTIKRC LLINYNPDSQ ELDFRHYSIK 200
VVPVGASRGM KKLLQEKFPN MSRLQDISEL LASGVGLSES EVEPDGEHNT 250
TELPQAVAGR GNMQAQQSAV RLTEIGPRMT LQLIKIQEGV GNGNVLFHNF 300
VHKTEEELQA ILAAKEEKLR LKAQRQNQQA ENLKRKQELR EAHKKKSLAG 350
IKRARAKADG DSDAEDPGAP PEAVGMSQLE EEEDDAEYFR QAVGEEPDED 400
LFPTVAKRRR QGGPVGKKRP GKEQRPGNKG RGQSGNWQAL KPHGRSQRVK 450
TKLGPRARSR DLGPPSRKGP 470
Length:470
Mass (Da):52,539
Last modified:March 1, 2005 - v1
Checksum:i0F6ECED6E3D50788
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06053663 Genomic DNA. No translation available.
BC089842 mRNA. Translation: AAH89842.1.
RefSeqiNP_001011980.1. NM_001011980.1.
UniGeneiRn.144881.

Genome annotation databases

EnsembliENSRNOT00000027973; ENSRNOP00000027974; ENSRNOG00000020608.
GeneIDi298699.
KEGGirno:298699.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06053663 Genomic DNA. No translation available.
BC089842 mRNA. Translation: AAH89842.1 .
RefSeqi NP_001011980.1. NM_001011980.1.
UniGenei Rn.144881.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 10116.ENSRNOP00000057914.

Proteomic databases

PaxDbi Q5FVQ2.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000027973 ; ENSRNOP00000027974 ; ENSRNOG00000020608 .
GeneIDi 298699.
KEGGi rno:298699.

Organism-specific databases

CTDi 56342.
RGDi 1306325. Ppan.

Phylogenomic databases

eggNOGi NOG272199.
GeneTreei ENSGT00530000064158.
HOGENOMi HOG000210038.
HOVERGENi HBG026954.
KOi K14859.
OMAi LGVTHLM.
OrthoDBi EOG71G9TZ.

Miscellaneous databases

NextBioi 644227.
PROi Q5FVQ2.

Gene expression databases

Genevestigatori Q5FVQ2.

Family and domain databases

InterProi IPR004154. Anticodon-bd.
IPR007109. Brix.
[Graphical view ]
Pfami PF04427. Brix. 1 hit.
[Graphical view ]
SMARTi SM00879. Brix. 1 hit.
[Graphical view ]
SUPFAMi SSF52954. SSF52954. 1 hit.
PROSITEi PS50833. BRIX. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: SpleenImported.
  2. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  3. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiQ5FVQ2_RAT
AccessioniPrimary (citable) accession number: Q5FVQ2
Secondary accession number(s): E9PTU3
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2005
Last sequence update: March 1, 2005
Last modified: September 3, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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