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Q5FVQ2

- Q5FVQ2_RAT

UniProt

Q5FVQ2 - Q5FVQ2_RAT

Protein
Submitted name:

Peter pan homolog (Drosophila)

Gene

Ppan

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 55 (01 Oct 2014)
      Sequence version 1 (01 Mar 2005)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Peter pan homolog (Drosophila)Imported
    Submitted name:
    Protein PpanImported
    Gene namesi
    Name:PpanImported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 8

    Organism-specific databases

    RGDi1306325. Ppan.

    PTM / Processingi

    Proteomic databases

    PaxDbiQ5FVQ2.

    Expressioni

    Gene expression databases

    GenevestigatoriQ5FVQ2.

    Interactioni

    Protein-protein interaction databases

    STRINGi10116.ENSRNOP00000057914.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG272199.
    GeneTreeiENSGT00530000064158.
    HOGENOMiHOG000210038.
    HOVERGENiHBG026954.
    KOiK14859.
    OMAiLGVTHLM.
    OrthoDBiEOG71G9TZ.

    Family and domain databases

    InterProiIPR004154. Anticodon-bd.
    IPR007109. Brix.
    [Graphical view]
    PfamiPF04427. Brix. 1 hit.
    [Graphical view]
    SMARTiSM00879. Brix. 1 hit.
    [Graphical view]
    SUPFAMiSSF52954. SSF52954. 1 hit.
    PROSITEiPS50833. BRIX. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q5FVQ2-1 [UniParc]FASTAAdd to Basket

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    MGQSGRSRHQ KRARAQAQLR NLEAYAAQPH SFVFTRGRAG RSVQQLSLDV    50
    RRVLEPLTAT RLQVRKKNSL KDCVAVAGPL GVTHFLVLSK TDSSVYLKLM 100
    RLPGGPTLTF QINKYTLIRD VVSSLRRHRM HEQQFNHPPL LILNSFGTPG 150
    MHVKLMATMF QNLFPSINVH TVNLNTIKRC LLINYNPDSQ ELDFRHYSIK 200
    VVPVGASRGM KKLLQEKFPN MSRLQDISEL LASGVGLSES EVEPDGEHNT 250
    TELPQAVAGR GNMQAQQSAV RLTEIGPRMT LQLIKIQEGV GNGNVLFHNF 300
    VHKTEEELQA ILAAKEEKLR LKAQRQNQQA ENLKRKQELR EAHKKKSLAG 350
    IKRARAKADG DSDAEDPGAP PEAVGMSQLE EEEDDAEYFR QAVGEEPDED 400
    LFPTVAKRRR QGGPVGKKRP GKEQRPGNKG RGQSGNWQAL KPHGRSQRVK 450
    TKLGPRARSR DLGPPSRKGP 470
    Length:470
    Mass (Da):52,539
    Last modified:March 1, 2005 - v1
    Checksum:i0F6ECED6E3D50788
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06053663 Genomic DNA. No translation available.
    BC089842 mRNA. Translation: AAH89842.1.
    RefSeqiNP_001011980.1. NM_001011980.1.
    UniGeneiRn.144881.

    Genome annotation databases

    EnsembliENSRNOT00000027973; ENSRNOP00000027974; ENSRNOG00000020608.
    GeneIDi298699.
    KEGGirno:298699.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06053663 Genomic DNA. No translation available.
    BC089842 mRNA. Translation: AAH89842.1 .
    RefSeqi NP_001011980.1. NM_001011980.1.
    UniGenei Rn.144881.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10116.ENSRNOP00000057914.

    Proteomic databases

    PaxDbi Q5FVQ2.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000027973 ; ENSRNOP00000027974 ; ENSRNOG00000020608 .
    GeneIDi 298699.
    KEGGi rno:298699.

    Organism-specific databases

    CTDi 56342.
    RGDi 1306325. Ppan.

    Phylogenomic databases

    eggNOGi NOG272199.
    GeneTreei ENSGT00530000064158.
    HOGENOMi HOG000210038.
    HOVERGENi HBG026954.
    KOi K14859.
    OMAi LGVTHLM.
    OrthoDBi EOG71G9TZ.

    Miscellaneous databases

    NextBioi 644227.
    PROi Q5FVQ2.

    Gene expression databases

    Genevestigatori Q5FVQ2.

    Family and domain databases

    InterProi IPR004154. Anticodon-bd.
    IPR007109. Brix.
    [Graphical view ]
    Pfami PF04427. Brix. 1 hit.
    [Graphical view ]
    SMARTi SM00879. Brix. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52954. SSF52954. 1 hit.
    PROSITEi PS50833. BRIX. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
      , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: SpleenImported.
    2. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
      Rat Genome Sequencing Project Consortium
      Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
      , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
      Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Brown NorwayImported.
    3. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Brown NorwayImported.

    Entry informationi

    Entry nameiQ5FVQ2_RAT
    AccessioniPrimary (citable) accession number: Q5FVQ2
    Secondary accession number(s): E9PTU3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 1, 2005
    Last sequence update: March 1, 2005
    Last modified: October 1, 2014
    This is version 55 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3