Q5FVM7 (DJC16_RAT) Reviewed, UniProtKB/Swiss-Prot
Last modified
November 16, 2011.
Version 61.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: DnaJ homolog subfamily C member 16 | ||
| Gene names |
| ||
| Organism | Rattus norvegicus (Rat) | ||
| Taxonomic identifier | 10116 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus |
Protein attributes
| Sequence length | 771 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at transcript level |
General annotation (Comments)
| Subcellular location | Membrane; Single-pass type IV membrane protein Potential. |
| Sequence similarities | Contains 1 J domain. Contains 1 thioredoxin domain. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Membrane |
| Domain | Signal Transmembrane Transmembrane helix |
| PTM | Glycoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | cell redox homeostasis Inferred from electronic annotation. Source: InterPro protein foldingInferred from electronic annotation. Source: InterPro |
| Cellular component | integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | heat shock protein binding Inferred from electronic annotation. Source: InterPro unfolded protein bindingInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 25 | 25 | Potential | ||||||
| Chain | 26 – 771 | 746 | DnaJ homolog subfamily C member 16 | PRO_0000236686 | |||||
Regions | |||||||||
| Topological domain | 26 – 532 | 507 | Cytoplasmic Potential | ||||||
| Transmembrane | 533 – 553 | 21 | Helical; Anchor for type IV membrane protein; Potential | ||||||
| Topological domain | 554 – 771 | 218 | Extracellular Potential | ||||||
| Domain | 29 – 93 | 65 | J | ||||||
| Domain | 116 – 244 | 129 | Thioredoxin | ||||||
Amino acid modifications | |||||||||
| Glycosylation | 628 | 1 | N-linked (GlcNAc...) Potential | ||||||
Sequences
| ||||||||||||||||||
References
| [1] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Liver. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | BC089875 mRNA. Translation: AAH89875.1. |
| IPI | IPI00359144. |
| RefSeq | NP_001014216.1. NM_001014194.1. |
| UniGene | Rn.198307. |
3D structure databases | |
| ProteinModelPortal | Q5FVM7. |
| SMR | Q5FVM7. Positions 19-100. |
| ModBase | Search... |
Proteomic databases | |
| PRIDE | Q5FVM7. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENSRNOT00000017247; ENSRNOP00000017247; ENSRNOG00000012503. |
| GeneID | 362652. |
| KEGG | rno:362652. |
| NMPDR | fig|10116.3.peg.24291. |
| UCSC | NM_001014194. rat. |
Organism-specific databases | |
| CTD | 23341. |
| RGD | 1359395. Dnajc16. |
Phylogenomic databases | |
| eggNOG | roNOG10127. |
| GeneTree | ENSGT00550000074587. |
| HOVERGEN | HBG055742. |
| InParanoid | Q5FVM7. |
| OMA | KLTAFAY. |
| OrthoDB | EOG4SQWW3. |
Gene expression databases | |
| Genevestigator | Q5FVM7. |
| GermOnline | ENSRNOG00000012503. Rattus norvegicus. |
Family and domain databases | |
| InterPro | IPR001623. DnaJ_N. IPR018253. Heat_shock_DnaJ_CS. IPR003095. Hsp_DnaJ. IPR012336. Thioredoxin-like_fold. IPR013766. Thioredoxin_domain. [Graphical view] |
| Gene3D | G3DSA:1.10.287.110. DnaJ_N. 1 hit. G3DSA:3.40.30.10. Thioredoxin_fold. 1 hit. |
| KO | K09536. |
| Pfam | PF00226. DnaJ. 1 hit. PF00085. Thioredoxin. 1 hit. [Graphical view] |
| PRINTS | PR00625. JDOMAIN. |
| SMART | SM00271. DnaJ. 1 hit. [Graphical view] |
| SUPFAM | SSF46565. DnaJ_N. 1 hit. SSF52833. Thiordxn-like_fd. 1 hit. |
| PROSITE | PS00636. DNAJ_1. 1 hit. PS50076. DNAJ_2. 1 hit. PS51352. THIOREDOXIN_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| NextBio | 680755. |
Entry information
| Entry name | DJC16_RAT | ||||||||
| Accession | Primary (citable) accession number: Q5FVM7 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
Relevant documents
| SIMILARITY comments Index of protein domains and families |

Clusters with