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Q5FRH8 (Q5FRH8_GLUOX) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
DNA topoisomerase I EMBL AAW61018.1
EC=5.99.1.2 EMBL AAW61018.1
Gene names
Ordered Locus Names:GOX1257
OrganismGluconobacter oxydans (strain 621H) (Gluconobacter suboxydans) [Complete proteome] [HAMAP] EMBL AAW61018.1
Taxonomic identifier290633 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhodospirillales › Acetobacteraceae › Gluconobacter

Protein attributes

Sequence length671 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionIsomerase EMBL AAW61018.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processDNA topological change

Inferred from electronic annotation. Source: InterPro

   Cellular componentchromosome

Inferred from electronic annotation. Source: InterPro

   Molecular functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

DNA topoisomerase (ATP-hydrolyzing) activity

Inferred from electronic annotation. Source: InterPro

DNA topoisomerase type I activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q5FRH8 [UniParc].

Last modified March 1, 2005. Version 1.
Checksum: D194281F58FA47E8

FASTA67173,758
        10         20         30         40         50         60 
MSDLFESGKT GKTRTGGARK GTVDTEYGAH DIEVLEGLEP VRRRPGMYIG GTDDTAYHHL 

        70         80         90        100        110        120 
ASEILDNAMD EAVAGHATTI DVRLEGPRTL MVRDNGRGIP TDPHPKFPEK SALEVIFTTL 

       130        140        150        160        170        180 
HAGGKFSGKA YDTSGGLHGV GSSVVNALSE KLEVEVARDR TLYRQDFVRG VSLAPLAEVG 

       190        200        210        220        230        240 
NAPNRRGTTV RFTPDPEIFG NHHFSPARLY RMCCSKAALF RGVTIQWKCE PSFIKAGDET 

       250        260        270        280        290        300 
PVEATIQFPN GLEDALSAEL GPDPDLLTPI WAGDVELPIA ADGRTGGRVE WAVAFLESGT 

       310        320        330        340        350        360 
ASLSSFCNTI PTPQGGTHEA GFRAALVKGL RAWGVQRKVK RAAAISAEDV LGSVAAKLSV 

       370        380        390        400        410        420 
FIRDPQFQGQ TKDKLTSQEA SRLVEGALRD RVDHWLGGNP QQADTLLAFM VERAEERLRR 

       430        440        450        460        470        480 
REVKDTARKS ATRKLRLPGK LTDCTRENAA ETELFLVEGE SAGGSARQAR DRETQAVLPL 

       490        500        510        520        530        540 
RGKILNVASA TTDKLRANQE LRDLTEALGC GIGASFDISR LRYGRVIIMT DADVDGAHIA 

       550        560        570        580        590        600 
SLLMTFFYRE MPELIRHGHL HLAQPPLYRI THGPKTVYAM DDQDRVRRIK ADFKPNAKVE 

       610        620        630        640        650        660 
VSRFKGLGEM PVKDLKETTM DPARRTLLRV ITPAEDRLAT SERVESLMGR KPELRFRFIQ 

       670 
EHARSVDELD V

« Hide

References

[1]"Complete genome sequence of the acetic acid bacterium Gluconobacter oxydans."
Prust C., Hoffmeister M., Liesegang H., Wiezer A., Fricke W.F., Ehrenreich A., Gottschalk G., Deppenmeier U.
Nat. Biotechnol. 23:195-200(2005) [PubMed: 15665824] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 621H.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000009 Genomic DNA. Translation: AAW61018.1.
RefSeqYP_191674.1. NC_006677.1.

3D structure databases

ProteinModelPortalQ5FRH8.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3250720.
GenomeReviewsGene locus GOX1257 in contig CP000009_GR.
KEGGgox:GOX1257.
NMPDRfig|290633.1.peg.1219.
PATRIC32610312. VBIGluOxy81109_1517.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG304889.
OMAQARDKEF.
ProtClustDBPRK05559.

Family and domain databases

InterProIPR003594. ATPase-like_ATP-bd.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
IPR001241. Topo_IIA.
IPR013759. Topo_IIA_B/N_ab.
IPR002288. Topo_IIA_B_C.
IPR013506. Topo_IIA_bsu_dom2.
IPR013760. Topo_IIA_cen.
IPR005737. TopoIV_B_Gneg.
[Graphical view]
Gene3DG3DSA:3.30.565.10. ATP_bd_ATPase. 1 hit.
G3DSA:3.30.230.10. Ribosomal_S5_D2-type_fold. 1 hit.
G3DSA:3.40.50.670. Topo_IIA_B/N_ab. 1 hit.
KOK02622.
PfamPF00204. DNA_gyraseB. 1 hit.
PF00986. DNA_gyraseB_C. 1 hit.
PF02518. HATPase_c. 1 hit.
[Graphical view]
PRINTSPR00418. TPI2FAMILY.
SMARTSM00387. HATPase_c. 1 hit.
SM00433. TOP2c. 1 hit.
[Graphical view]
SUPFAMSSF55874. ATP_bd_ATPase. 1 hit.
SSF54211. Ribosomal_S5_D2-typ_fold. 1 hit.
SSF56719. Topo_IIA_cen. 1 hit.
TIGRFAMsTIGR01055. ParE_Gneg. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ5FRH8_GLUOX
AccessionPrimary (citable) accession number: Q5FRH8
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2005
Last sequence update: March 1, 2005
Last modified: January 25, 2012
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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