Q5FJG8 (Q5FJG8_LACAC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Geranylgeranyl diphosphate (GGPP) synthase EMBL AAV43156.1
EC=2.5.1.- EMBL AAV43156.1

Gene names

Ordered Locus Names:

LBA1329

Organism

Lactobacillus acidophilus (strain ATCC 700396 / NCK56 / N2 / NCFM) [Complete proteome] [HAMAP]

Taxonomic identifier

272621 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Lactobacillales › Lactobacillaceae › Lactobacillus › Lactobacillus acidophilus

Protein attributes

Sequence length	289 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the FPP/GGPP synthase family. RuleBase RU004466

Ontologies

Keywords
Biological process	Isoprene biosynthesis RuleBase RU004466
Molecular function	Transferase RuleBase RU004466 EMBL AAV43156.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	isoprenoid biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	transferase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5FJG8 [UniParc]. Last modified March 1, 2005. Version 1. Checksum: EC78805122B0D2C1	FASTA	289	32,077
	10 20 30 40 50 60 MTAFTYFKDE WTPVIDNYLA KHLASEIDDQ KISQIMSYSV MAGGKRLRPL LFLATLNALG 70 80 90 100 110 120 KKIEESEIRL ACGIELIHTY SLIHDDLPAM DNDDYRRGKL TSHKKWGEAE AILAGDALLP 130 140 150 160 170 180 LGVQWIAEGS NSSELVIMIT KAIGANGMVG GQYLDIDSTN NASVADDEKF INKMEWLKTG 190 200 210 220 230 240 CLIQASVEMA AVYAKASDIE QVKLVDFAKT FGRSYQIYDD LVDVVETSEE AGKATHKDEE 250 260 270 280 EGKNNTLTLL GIEKSRKELK DLISQAKADL HGINNEVLLG FLDLYHKVL

References

[1]

"Complete genome sequence of the probiotic lactic acid bacterium Lactobacillus acidophilus NCFM." Altermann E., Russell W.M., Azcarate-Peril M.A., Barrangou R., Buck B.L., McAuliffe O., Souther N., Dobson A., Duong T., Callanan M., Lick S., Hamrick A., Cano R., Klaenhammer T.R. Proc. Natl. Acad. Sci. U.S.A. 102:3906-3912(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700396 / NCK56 / N2 / NCFM.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000033 Genomic DNA. Translation: AAV43156.1.
RefSeq	YP_194187.1. NC_006814.3.
3D structure databases
ProteinModelPortal	Q5FJG8.
ModBase	Search...
Protein-protein interaction databases
STRING	272621.LBA1329.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAV43156; AAV43156; LBA1329.
GeneID	3252489.
KEGG	lac:LBA1329.
PATRIC	22197686. VBILacAci7974_1257.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0142.
HOGENOM	HOG000009101.
KO	K13789.
OMA	QSMKTGA.
ProtClustDB	CLSK764397.
Enzyme and pathway databases
BioCyc	LACI272621:GJO8-2148-MONOMER.
Family and domain databases
Gene3D	1.10.600.10. 1 hit.
InterPro	IPR000092. Polyprenyl_synt. IPR017446. Polyprenyl_synth-rel. IPR008949. Terpenoid_synth. [Graphical view]
PANTHER	PTHR12001. PTHR12001. 1 hit.
Pfam	PF00348. polyprenyl_synt. 1 hit. [Graphical view]
SUPFAM	SSF48576. Terpenoid_synth. 1 hit.
PROSITE	PS00723. POLYPRENYL_SYNTHASE_1. 1 hit. PS00444. POLYPRENYL_SYNTHASE_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q5FJG8_LACAC

Accession

Primary (citable) accession number: Q5FJG8

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2005
Last sequence update:	March 1, 2005
Last modified:	May 1, 2013
This is version 56 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)