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Protein
Submitted name:

Glycerol uptake facilitator protein

Gene

glpF

Organism
Lactobacillus acidophilus (strain ATCC 700396 / NCK56 / N2 / NCFM)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Glycerol uptake facilitator proteinImported
Gene namesi
Name:glpFImported
Ordered Locus Names:LBA1436Imported
OrganismiLactobacillus acidophilus (strain ATCC 700396 / NCK56 / N2 / NCFM)Imported
Taxonomic identifieri272621 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
Proteomesi
  • UP000006381 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei6 – 2520HelicalSequence analysisAdd
BLAST
Transmembranei37 – 5620HelicalSequence analysisAdd
BLAST
Transmembranei87 – 10620HelicalSequence analysisAdd
BLAST
Transmembranei134 – 15219HelicalSequence analysisAdd
BLAST
Transmembranei164 – 18522HelicalSequence analysisAdd
BLAST
Transmembranei212 – 23423HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi272621.LBA1436.

Structurei

3D structure databases

ProteinModelPortaliQ5FJ63.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the MIP/aquaporin (TC 1.A.8) family. [View classification]UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105D8C. Bacteria.
COG0580. LUCA.
HOGENOMiHOG000288285.
KOiK02440.
OMAiSFQVLGC.
OrthoDBiEOG6P8TRZ.

Family and domain databases

Gene3Di1.20.1080.10. 1 hit.
InterProiIPR023271. Aquaporin-like.
IPR000425. MIP.
IPR022357. MIP_CS.
[Graphical view]
PANTHERiPTHR19139. PTHR19139. 1 hit.
PfamiPF00230. MIP. 1 hit.
[Graphical view]
PRINTSiPR00783. MINTRINSICP.
SUPFAMiSSF81338. SSF81338. 1 hit.
PROSITEiPS00221. MIP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5FJ63-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGFIGEFLG TMVLIVLGTG CGAAINLNKS YAKGSHWLYV TIAWGMAVTF
60 70 80 90 100
GVYVAANFGS QGHLNPAVTI GFAAFGFFPW SGVLPYLLGQ FLGAFVGAVL
110 120 130 140 150
VIIQYYPHFK ATKTTEEGNQ VGIFATAPAI KNNLFNFLSE TIATFIFIFA
160 170 180 190 200
LLNLGDFDKG LKPLIVGLLI MVVGQGLGAT TGFALNPARD WSPRLAYTIL
210 220 230
PVPNKSSANW QYAWVPMCGP IVGGLLASAL QYFLK
Length:235
Mass (Da):25,133
Last modified:March 1, 2005 - v1
Checksum:iD38219B1EDAE7F8C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000033 Genomic DNA. Translation: AAV43261.1.
RefSeqiWP_003548130.1. NC_006814.3.
YP_194292.1. NC_006814.3.

Genome annotation databases

EnsemblBacteriaiAAV43261; AAV43261; LBA1436.
GeneIDi3252917.
KEGGilac:LBA1436.
PATRICi22197898. VBILacAci7974_1362.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000033 Genomic DNA. Translation: AAV43261.1.
RefSeqiWP_003548130.1. NC_006814.3.
YP_194292.1. NC_006814.3.

3D structure databases

ProteinModelPortaliQ5FJ63.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272621.LBA1436.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAV43261; AAV43261; LBA1436.
GeneIDi3252917.
KEGGilac:LBA1436.
PATRICi22197898. VBILacAci7974_1362.

Phylogenomic databases

eggNOGiENOG4105D8C. Bacteria.
COG0580. LUCA.
HOGENOMiHOG000288285.
KOiK02440.
OMAiSFQVLGC.
OrthoDBiEOG6P8TRZ.

Family and domain databases

Gene3Di1.20.1080.10. 1 hit.
InterProiIPR023271. Aquaporin-like.
IPR000425. MIP.
IPR022357. MIP_CS.
[Graphical view]
PANTHERiPTHR19139. PTHR19139. 1 hit.
PfamiPF00230. MIP. 1 hit.
[Graphical view]
PRINTSiPR00783. MINTRINSICP.
SUPFAMiSSF81338. SSF81338. 1 hit.
PROSITEiPS00221. MIP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700396 / NCK56 / N2 / NCFMImported.

Entry informationi

Entry nameiQ5FJ63_LACAC
AccessioniPrimary (citable) accession number: Q5FJ63
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2005
Last sequence update: March 1, 2005
Last modified: March 16, 2016
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.