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Protein

50S ribosomal protein L16

Gene

rplP

Organism
Ehrlichia ruminantium (strain Gardel)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding, tRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L16UniRule annotation
Gene namesi
Name:rplPUniRule annotation
Ordered Locus Names:ERGA_CDS_06220
OrganismiEhrlichia ruminantium (strain Gardel)
Taxonomic identifieri302409 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesAnaplasmataceaeEhrlichia
Proteomesi
  • UP000000533 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000620971 – 13650S ribosomal protein L16Add BLAST136

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliQ5FFU7.
SMRiQ5FFU7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL16 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000164573.
KOiK02878.
OMAiKGAVEYW.
OrthoDBiPOG091H01B8.

Family and domain databases

CDDicd01433. Ribosomal_L16_L10e. 1 hit.
Gene3Di3.90.1170.10. 1 hit.
HAMAPiMF_01342. Ribosomal_L16. 1 hit.
InterProiView protein in InterPro
IPR016180. Ribosomal_L10e/L16.
IPR036920. Ribosomal_L10e/L16_sf.
IPR000114. Ribosomal_L16.
IPR020798. Ribosomal_L16_CS.
PANTHERiPTHR12220. PTHR12220. 1 hit.
PfamiView protein in Pfam
PF00252. Ribosomal_L16. 1 hit.
PRINTSiPR00060. RIBOSOMALL16.
SUPFAMiSSF54686. SSF54686. 1 hit.
TIGRFAMsiTIGR01164. rplP_bact. 1 hit.
PROSITEiView protein in PROSITE
PS00701. RIBOSOMAL_L16_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5FFU7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFIPKKTKYK KDFKGRISGN AKGGYTLAFG TYGLKSLEPG RLTSKQVESA
60 70 80 90 100
RRSISRTLKR VGKVWIRVFC HTPVSKKPMD VRMGKGKGSI EMWVCKVKPG
110 120 130
KILFEISGVS LNLAKEALQK SQAKLPVKCK FISDEL
Length:136
Mass (Da):15,208
Last modified:March 1, 2005 - v1
Checksum:i1EAE7A3764EBD66A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR925677 Genomic DNA. Translation: CAI28074.1.
RefSeqiWP_011155282.1. NC_006831.1.

Genome annotation databases

EnsemblBacteriaiCAI28074; CAI28074; ERGA_CDS_06220.
GeneIDi33058430.
KEGGierg:ERGA_CDS_06220.

Similar proteinsi

Entry informationi

Entry nameiRL16_EHRRG
AccessioniPrimary (citable) accession number: Q5FFU7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 10, 2006
Last sequence update: March 1, 2005
Last modified: October 25, 2017
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families