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Protein

Ribosomal RNA small subunit methyltransferase J

Gene

rsmJ

Organism
Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Specifically methylates the guanosine in position 1516 of 16S rRNA.UniRule annotation

Catalytic activityi

S-adenosyl-L-methionine + guanine(1516) in 16S rRNA = S-adenosyl-L-homocysteine + N(2)-methylguanine(1516) in 16S rRNA.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei168 – 1681S-adenosyl-L-methionineUniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Methyltransferase, Transferase

Keywords - Biological processi

rRNA processing

Keywords - Ligandi

S-adenosyl-L-methionine

Enzyme and pathway databases

BioCyciNGON242231:GI2G-1178-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal RNA small subunit methyltransferase JUniRule annotation (EC:2.1.1.242UniRule annotation)
Alternative name(s):
16S rRNA m2G1516 methyltransferaseUniRule annotation
rRNA (guanine-N(2)-)-methyltransferaseUniRule annotation
Gene namesi
Name:rsmJUniRule annotation
Ordered Locus Names:NGO1261
OrganismiNeisseria gonorrhoeae (strain ATCC 700825 / FA 1090)
Taxonomic identifieri242231 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaNeisserialesNeisseriaceaeNeisseria
Proteomesi
  • UP000000535 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 250250Ribosomal RNA small subunit methyltransferase JPRO_0000212076Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ5F7B7.
SMRiQ5F7B7. Positions 2-250.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni96 – 972S-adenosyl-L-methionine bindingUniRule annotation

Sequence similaritiesi

Belongs to the methyltransferase superfamily. RsmJ family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000218236.
KOiK15984.
OMAiSSRYDIY.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
HAMAPiMF_01523. 16SrRNA_methyltr_J. 1 hit.
InterProiIPR007536. 16SrRNA_methylTrfase_J.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF04445. SAM_MT. 1 hit.
[Graphical view]
SUPFAMiSSF53335. SSF53335. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5F7B7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTDILIDDTA TEAVRTLIRA FPLVPVSQPP EQGSYLLAEH DTVSLRLVGE
60 70 80 90 100
KSNVIVDFTS GAAQYRRTKG GGELIAKAVN HTAHPTVWDA TAGLGRDSFV
110 120 130 140 150
LASLGLTVTA FEQHPAVACL LSDGIRRALL NPETQDTAAR INLHFGNAAE
160 170 180 190 200
QMPALVKTQG KPDIVYLDPM YPERRKSAAV KKEMAYFHRL VGEAQDEVVL
210 220 230 240 250
LHTARQTAKK RVVVKRPRLG EHLAGQAPAY QYTGKSTRFD VYLPYGADKG
Length:250
Mass (Da):27,316
Last modified:March 15, 2005 - v1
Checksum:iFC749D6B91985763
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE004969 Genomic DNA. Translation: AAW89920.1.
RefSeqiWP_003689730.1. NC_002946.2.
YP_208332.1. NC_002946.2.

Genome annotation databases

EnsemblBacteriaiAAW89920; AAW89920; NGO_1261.
GeneIDi3282590.
KEGGingo:NGO_1261.
PATRICi20335853. VBINeiGon24812_1481.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE004969 Genomic DNA. Translation: AAW89920.1.
RefSeqiWP_003689730.1. NC_002946.2.
YP_208332.1. NC_002946.2.

3D structure databases

ProteinModelPortaliQ5F7B7.
SMRiQ5F7B7. Positions 2-250.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAW89920; AAW89920; NGO_1261.
GeneIDi3282590.
KEGGingo:NGO_1261.
PATRICi20335853. VBINeiGon24812_1481.

Phylogenomic databases

HOGENOMiHOG000218236.
KOiK15984.
OMAiSSRYDIY.

Enzyme and pathway databases

BioCyciNGON242231:GI2G-1178-MONOMER.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
HAMAPiMF_01523. 16SrRNA_methyltr_J. 1 hit.
InterProiIPR007536. 16SrRNA_methylTrfase_J.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF04445. SAM_MT. 1 hit.
[Graphical view]
SUPFAMiSSF53335. SSF53335. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRSMJ_NEIG1
AccessioniPrimary (citable) accession number: Q5F7B7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 10, 2005
Last sequence update: March 15, 2005
Last modified: September 7, 2016
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.