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Protein

50S ribosomal protein L3 glutamine methyltransferase

Gene

prmB

Organism
Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue.UniRule annotation

Catalytic activityi

S-adenosyl-L-methionine + [ribosomal protein L3]-L-glutamine = S-adenosyl-L-homocysteine + [ribosomal protein L3]-N(5)-methyl-L-glutamine.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Methyltransferase, Transferase

Keywords - Ligandi

S-adenosyl-L-methionine

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L3 glutamine methyltransferaseUniRule annotation (EC:2.1.1.298UniRule annotation)
Short name:
L3 MTaseUniRule annotation
Alternative name(s):
N5-glutamine methyltransferase PrmBUniRule annotation
Gene namesi
Name:prmBUniRule annotation
Ordered Locus Names:NGO1300
OrganismiNeisseria gonorrhoeae (strain ATCC 700825 / FA 1090)
Taxonomic identifieri242231 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaNeisserialesNeisseriaceaeNeisseria
Proteomesi
  • UP000000535 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004141801 – 30350S ribosomal protein L3 glutamine methyltransferaseAdd BLAST303

Structurei

3D structure databases

ProteinModelPortaliQ5F783.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000076275.
KOiK07320.
OMAiVLVCEVG.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
HAMAPiMF_02125. L3_methyltr_PrmB. 1 hit.
InterProiIPR002052. DNA_methylase_N6_adenine_CS.
IPR004556. Modification_methylase_HemK.
IPR017127. Ribosome_L3_Gln-N5_MeTrfase.
IPR029063. SAM-dependent_MTases.
IPR007848. Small_mtfrase_dom.
[Graphical view]
PfamiPF05175. MTS. 1 hit.
[Graphical view]
PIRSFiPIRSF037167. Mtase_YfcB_prd. 1 hit.
SUPFAMiSSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00536. hemK_fam. 1 hit.
TIGR03533. L3_gln_methyl. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5F783-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVHIMFNQAA QELTTIRDVL RFAVSRFNEA GLFFGHGTDN AHDEAVYLIL
60 70 80 90 100
HTLNLPLDML APYLDAKLLE AEKEEVLAVI ERRAVEHIPA AYLTHQAWQG
110 120 130 140 150
EFDFYVDERV IVPRSFIYEL LGDGLRPWIE YDELVHNALD LCTGSGCLAI
160 170 180 190 200
QMAHHYPDAQ IDAVDVSLDA LEVAGINIED YGLEERIQLI HTDLFEGLEG
210 220 230 240 250
TYDLIVSNPP YVDAESVGAL PEEYLHEPEL ALGSGADGLD ATRQILLNAA
260 270 280 290 300
KFLNPKGVLL VEIGHNRDVL EAAYPELPFT WLETSGGDGF VFLLTREQLL

GEE
Length:303
Mass (Da):33,827
Last modified:March 15, 2005 - v1
Checksum:iFB141734F9C03F17
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE004969 Genomic DNA. Translation: AAW89954.1.
RefSeqiWP_003691605.1. NC_002946.2.
YP_208366.1. NC_002946.2.

Genome annotation databases

EnsemblBacteriaiAAW89954; AAW89954; NGO_1300.
GeneIDi3281814.
KEGGingo:NGO_1300.
PATRICi20335947. VBINeiGon24812_1528.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE004969 Genomic DNA. Translation: AAW89954.1.
RefSeqiWP_003691605.1. NC_002946.2.
YP_208366.1. NC_002946.2.

3D structure databases

ProteinModelPortaliQ5F783.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAW89954; AAW89954; NGO_1300.
GeneIDi3281814.
KEGGingo:NGO_1300.
PATRICi20335947. VBINeiGon24812_1528.

Phylogenomic databases

HOGENOMiHOG000076275.
KOiK07320.
OMAiVLVCEVG.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
HAMAPiMF_02125. L3_methyltr_PrmB. 1 hit.
InterProiIPR002052. DNA_methylase_N6_adenine_CS.
IPR004556. Modification_methylase_HemK.
IPR017127. Ribosome_L3_Gln-N5_MeTrfase.
IPR029063. SAM-dependent_MTases.
IPR007848. Small_mtfrase_dom.
[Graphical view]
PfamiPF05175. MTS. 1 hit.
[Graphical view]
PIRSFiPIRSF037167. Mtase_YfcB_prd. 1 hit.
SUPFAMiSSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00536. hemK_fam. 1 hit.
TIGR03533. L3_gln_methyl. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiPRMB_NEIG1
AccessioniPrimary (citable) accession number: Q5F783
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 14, 2011
Last sequence update: March 15, 2005
Last modified: November 2, 2016
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.