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Q5F4Z4

- ATPF_NEIG1

UniProt

Q5F4Z4 - ATPF_NEIG1

Protein

ATP synthase subunit b

Gene

atpF

Organism
Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 59 (01 Oct 2014)
      Sequence version 1 (15 Mar 2005)
      Previous versions | rss
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    Functioni

    F1F0 ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F1 containing the extramembraneous catalytic core and F0 containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F1 is coupled via a rotary mechanism of the central stalk subunits to proton translocation.UniRule annotation
    Component of the F0 channel, it forms part of the peripheral stalk, linking F1 to F0.UniRule annotation

    GO - Molecular functioni

    1. proton-transporting ATP synthase activity, rotational mechanism Source: UniProtKB-HAMAP

    GO - Biological processi

    1. plasma membrane ATP synthesis coupled proton transport Source: UniProtKB-HAMAP

    Keywords - Biological processi

    ATP synthesis, Hydrogen ion transport, Ion transport, Transport

    Enzyme and pathway databases

    BioCyciNGON242231:GI2G-2037-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    ATP synthase subunit bUniRule annotation
    Alternative name(s):
    ATP synthase F(0) sector subunit bUniRule annotation
    ATPase subunit IUniRule annotation
    F-type ATPase subunit bUniRule annotation
    Short name:
    F-ATPase subunit bUniRule annotation
    Gene namesi
    Name:atpFUniRule annotation
    Ordered Locus Names:NGO2146
    OrganismiNeisseria gonorrhoeae (strain ATCC 700825 / FA 1090)
    Taxonomic identifieri242231 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaNeisserialesNeisseriaceaeNeisseria
    ProteomesiUP000000535: Chromosome

    Subcellular locationi

    Cell inner membrane UniRule annotation; Single-pass membrane protein UniRule annotation

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW
    2. plasma membrane Source: UniProtKB-SubCell
    3. proton-transporting ATP synthase complex, coupling factor F(o) Source: UniProtKB-KW

    Keywords - Cellular componenti

    Cell inner membrane, Cell membrane, CF(0), Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 156156ATP synthase subunit bPRO_0000368619Add
    BLAST

    Interactioni

    Subunit structurei

    F-type ATPases have 2 components, F1 - the catalytic core - and F0 - the membrane proton channel. F1 has five subunits: alpha3, beta3, gamma1, delta1, epsilon1. F0 has three main subunits: a1, b2 and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F1 is attached to F0 by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.UniRule annotation

    Protein-protein interaction databases

    STRINGi242231.NGO2146.

    Structurei

    3D structure databases

    ProteinModelPortaliQ5F4Z4.
    ModBaseiSearch...
    MobiDBiSearch...

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei7 – 2721HelicalUniRule annotationAdd
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ATPase B chain family.UniRule annotation

    Keywords - Domaini

    Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiCOG0711.
    HOGENOMiHOG000015378.
    KOiK02109.
    OMAiLIFWTAV.
    OrthoDBiEOG6DNTDK.

    Family and domain databases

    Gene3Di1.20.5.620. 1 hit.
    HAMAPiMF_01398. ATP_synth_b_bact.
    InterProiIPR028987. ATPase_B-like_membr.
    IPR002146. ATPase_F0-cplx_b/b'su_bac.
    IPR005864. ATPase_F0-cplx_bsu_bac.
    [Graphical view]
    PfamiPF00430. ATP-synt_B. 1 hit.
    [Graphical view]
    SUPFAMiSSF81573. SSF81573. 1 hit.
    TIGRFAMsiTIGR01144. ATP_synt_b. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q5F4Z4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNINATLFAQ IIVFFGLVWF TMKFVWPPIA KALDERAAKI AEGLAAAERG    50
    KSDFEQAEKK VAELLAEGRN QVSEMVANAE KRAAKIVEEA KEQASSEAAR 100
    IAAQAKADVE QELFRARESL RDQVAVLAVK GAESILRSEV DASKHAKLLD 150
    TLKQEL 156
    Length:156
    Mass (Da):17,139
    Last modified:March 15, 2005 - v1
    Checksum:i6DE2BAC3C57874C5
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE004969 Genomic DNA. Translation: AAW90743.1.
    RefSeqiYP_209155.1. NC_002946.2.

    Genome annotation databases

    EnsemblBacteriaiAAW90743; AAW90743; NGO2146.
    GeneIDi3282775.
    KEGGingo:NGO2146.
    PATRICi20338145. VBINeiGon24812_2595.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE004969 Genomic DNA. Translation: AAW90743.1 .
    RefSeqi YP_209155.1. NC_002946.2.

    3D structure databases

    ProteinModelPortali Q5F4Z4.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 242231.NGO2146.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAW90743 ; AAW90743 ; NGO2146 .
    GeneIDi 3282775.
    KEGGi ngo:NGO2146.
    PATRICi 20338145. VBINeiGon24812_2595.

    Phylogenomic databases

    eggNOGi COG0711.
    HOGENOMi HOG000015378.
    KOi K02109.
    OMAi LIFWTAV.
    OrthoDBi EOG6DNTDK.

    Enzyme and pathway databases

    BioCyci NGON242231:GI2G-2037-MONOMER.

    Family and domain databases

    Gene3Di 1.20.5.620. 1 hit.
    HAMAPi MF_01398. ATP_synth_b_bact.
    InterProi IPR028987. ATPase_B-like_membr.
    IPR002146. ATPase_F0-cplx_b/b'su_bac.
    IPR005864. ATPase_F0-cplx_bsu_bac.
    [Graphical view ]
    Pfami PF00430. ATP-synt_B. 1 hit.
    [Graphical view ]
    SUPFAMi SSF81573. SSF81573. 1 hit.
    TIGRFAMsi TIGR01144. ATP_synt_b. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The complete genome sequence of Neisseria gonorrhoeae."
      Lewis L.A., Gillaspy A.F., McLaughlin R.E., Gipson M., Ducey T.F., Ownbey T., Hartman K., Nydick C., Carson M.B., Vaughn J., Thomson C., Song L., Lin S., Yuan X., Najar F., Zhan M., Ren Q., Zhu H.
      , Qi S., Kenton S.M., Lai H., White J.D., Clifton S., Roe B.A., Dyer D.W.
      Submitted (MAR-2003) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 700825 / FA 1090.

    Entry informationi

    Entry nameiATPF_NEIG1
    AccessioniPrimary (citable) accession number: Q5F4Z4
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: April 14, 2009
    Last sequence update: March 15, 2005
    Last modified: October 1, 2014
    This is version 59 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3