Unreviewed, UniProtKB/TrEMBL Q5F4U0 (Q5F4U0_CAEEL)

Names and origin

Protein names

Submitted name:
    Cadherin family protein 10 EMBL AAW88406.1

Gene names

Name:	cdh-10 EMBL AAW88406.1 WormBase WBGene00000402
ORF Names:	C45G7.5 EMBL AAW88406.1 WormPep C45G7.5 WormBase WBGene00000402

Organism

Caenorhabditis elegans [Complete proteome]

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	2302 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level.

Ontologies

Keywords
Cellular component	Membrane
Domain	Transmembrane Spearmint SPM002126
Ligand	Calcium RuleBase RU000484V3
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	homophilic cell adhesion Inferred from electronic annotation. Source: InterPro
Cellular component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from electronic annotation. Source: InterPro
Molecular function	calcium ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5F4U0-1 [UniParc]. Last modified March 15, 2005. Version 1. Checksum: 16C1FB965F32173E	FASTA	2,302	254,420
	10 20 30 40 50 60 MREISLTFFI LLLSGELIAN ERHHEHSLKH VQKRHDIPLE FIMNSQEHSD IRRSVRLEKE 70 80 90 100 110 120 PNLERLSSDK FVVRRDSSDS STEVVGDENS VPDKFDQPSY DFMLPEGKTE NSTILAVVDF 130 140 150 160 170 180 ITRKHNVKPA FVVNFDENEW FAIGNVEKTR ADNADVYKAT VILRQNSNVE IAKTEGGLYR 190 200 210 220 230 240 FVVEAQQGEV VLATTNISVD VIKLAPTTKR TRVTVPDRPK LMETTVPVTS SSSTSSEMIE 250 260 270 280 290 300 VDGESETQED LTLGGGGAEA TSTETTTVPM TSPEEEVVTS SAATSPASTA DFSDDDDLTI 310 320 330 340 350 360 PVTSPEPTQP KDSEEEEEVE VLDGSGEGSA DVLTTTETNE GSGELLDSST SSNLPASSSE 370 380 390 400 410 420 ASLVEEEEDP ITGPVSILPL QNSPDGIIEP LDIQLTISPS DVIKVPRDAR PGDVIRNLQV 430 440 450 460 470 480 EFQSATENLR KTKKIELEIE PAGFLEIRPK ILNFDEKAMI FIGDLAESLS ENLQIVAKIG 490 500 510 520 530 540 NSTLRTPIRL DLTEYLENPG NSDGSEMLSL REVEFAVTET AESGRTIGQV DSDLKIIGGN 550 560 570 580 590 600 GNRKFSLVGN DLILSCSQFD TEKCLENDDQ KSFSLILMPK NGALAPVQVT IIVQQKANLR 610 620 630 640 650 660 TSDKVIRISD NRIISPFAVI TERTRKDIQL GGDAAKFLGF VKAQEGLYQI IVINSAASGR 670 680 690 700 710 720 YSLDISIDDD TQSKTIEVFV ENSQSHAHFR KSKYSLEVDA GKVENGLKLT QVELEGVPID 730 740 750 760 770 780 EAKIMVLDGN PGWVTVEEYG GKVNVGKYDG PIYNGKFPIR IGAVDKKTWT ILTETIVEID 790 800 810 820 830 840 VKNGQEPLEN EQKIEEKSGK SRVLEATFDR EKSEDFEIQL DEKNMKLDLK SMYGIDEKGQ 850 860 870 880 890 900 KVTLDPTSIT VTSTHVQLTP DSLKSLRLIG MTLKNPDSQK INILVRLISS PEYLKNQEKL 910 920 930 940 950 960 AQRPIYPMPW TRENPVIHVE LREELAQGQV VGVFPAVSQG NLSREIQISG LMSDAFDFNG 970 980 990 1000 1010 1020 TTGELKIKQR IDYETLDEAQ KTFNLTLSSG ENGFKSEAIL MVQVTDVDDN SPVVDVGDAE 1030 1040 1050 1060 1070 1080 MISLPENLSA GTKIAEFDVT DPDGSESYQV ELEGDGSKNF MANITSSNTT ATLSIFIAEN 1090 1100 1110 1120 1130 1140 AKIDRETQDF IALLVKILDI SGNSEKIILP IRVLDVNDNA PQFEQNLYDV EVMEDLPSGM 1150 1160 1170 1180 1190 1200 VIHRVHAMDS DAPGAASTVN YQISNPSDVT DDVISVNSTS GVVQISGSLW GMPREQPYKF 1210 1220 1230 1240 1250 1260 QVIAQDFGAP GLNSTSILSL RVRNKDEVVT EEAVEFEEIT QEVVIQENLA PDTKIYTAKA 1270 1280 1290 1300 1310 1320 VLRGIPSKTR GKVVYTLKDL LSSEKEPIFA VDKDSGDIFV VKPIDFEERS EYTVYSMGKL 1330 1340 1350 1360 1370 1380 EKLGRSLLKK LRSSSSRRDN VPTSSSSSSD SDEYVHKFQV VPPETLDDRV GSPGAGSDEG 1390 1400 1410 1420 1430 1440 SAGYATDDTV MSSLSPLDIK RESVDYSESQ GYYSNAELSP GTVPAHLSPR QLSPTVPSEG 1450 1460 1470 1480 1490 1500 YEIPIERRVT VPVQKPKEPA HLTENTPVPR IPGVTVEDPA HQTTSLRNTV PLRQFSNQRS 1510 1520 1530 1540 1550 1560 TVPLKEPARQ TTRSAVPSPT VPKIITVPEP AHQTDSQRVT APSPVPRILG VTIPESAHQT 1570 1580 1590 1600 1610 1620 QTLRSAVHTP TVPKILGVTV PEPLRSTIPG ITVDLVDPVP RTTHYKKQDF PKINIRNRHH 1630 1640 1650 1660 1670 1680 PIYKSSNQLL AAAAESNLKF PAKIERAATL SNLAAEPEDE DPIDKFMRSH IYKTKMITTV 1690 1700 1710 1720 1730 1740 FEAKDRGFEE IGDDVIHEID RWFETKNMMA VACELHWSVP REKRSRQLEC RLKEKLLQAL 1750 1760 1770 1780 1790 1800 RENNKRLLYL RGMGHGKTPV KLAESSTVEN ISKDRETDSV RGIYQRSYTR LLPYLHKETP 1810 1820 1830 1840 1850 1860 EWHSQYWTLQ DLEKSDDVES PNYPIQPNPQ KFLFDTEPAE LLITAFNSGN ELVTSSTLLK 1870 1880 1890 1900 1910 1920 IRVENLDDNE PEFLPSALPI FQVPKNTSKP TAIGRLTARD ADFSPIFYHL LPNCGTPESS 1930 1940 1950 1960 1970 1980 DNFNIDAEFG EIVYEPKVDP SSKMTEAEVC FIATSQKNLD TSEVFFDANS KNFKRVKVEF 1990 2000 2010 2020 2030 2040 VGDSVDSVAN SGKINNGFSG NQSISSVGDV LDRVEIPMNL GAAAGAQDYE QKSLNFVPAN 2050 2060 2070 2080 2090 2100 YELGRDMISP EGAVELNKNT GELVANGKIL DTPQGVYTAE IGRGDGGEGV KQLHHIRNDR 2110 2120 2130 2140 2150 2160 KLRYVLSMSR NEFGANLEKF RRQILEAIGK DDQKAGKQLE IHFDEPKADR KNSTWTSVCF 2170 2180 2190 2200 2210 2220 YLTRQNAILD ENQASSIISP SNGHISKLHH IFKVQNVDMC APKPSATSSE STSSSNSDIP 2230 2240 2250 2260 2270 2280 LNTLILIGVV GLLIIALLAL LIYVCCVSRY QRYLKQKTDQ LRCSSSAGSY YKSPNLIPPP 2290 2300 PPGYMHTPPL PPPPPPMAIA YY

References

[1]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AF067611 Genomic DNA. Translation: AAW88406.1.
RefSeq	NP_500204.2.
UniGene	Cel.13319
3D structure databases
SMR	Q5F4U0. Positions 917-1010, 1022-1222.
ModBase	Search...
Genome annotation databases
Ensembl	C45G7.5; C45G7.5; C45G7.5; Caenorhabditis elegans. [Genome view]
GeneID	183476.
KEGG	cel:C45G7.5.
UCSC	C45G7.5. c. elegans.
Organism-specific databases
CTD	183476.
WormBase	WBGene00000402. cdh-10.
WormPep	C45G7.5. CE38044. [WorfDB]
Phylogenomic databases
eggNOG	meNOG05105.
InParanoid	Q5F4U0.
Gene expression databases
ArrayExpress	Q5F4U0.
Family and domain databases
InterPro	IPR002126. Cadherin. IPR015919. Cadherin-like. IPR020894. Cadherin_CS. [Graphical view]
Gene3D	G3DSA:2.60.40.60. Cadherin. 3 hits.
Pfam	PF00028. Cadherin. 1 hit. [Graphical view]
PRINTS	PR00205. CADHERIN.
SMART	SM00112. CA. 3 hits. [Graphical view]
PROSITE	PS00232. CADHERIN_1. 1 hit. PS50268. CADHERIN_2. 5 hits. [Graphical view]
ProtoNet	Search...
Other Resources
NextBio	921280.

Entry information

Entry name

Q5F4U0_CAEEL

Accession

Primary (citable) accession number: Q5F4U0

Entry history

Integrated into UniProtKB/TrEMBL:	March 15, 2005
Last sequence update:	March 15, 2005
Last modified:	February 9, 2010
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)