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Protein

Polypeptide N-acetylgalactosaminyltransferase

Gene

GALNT6

Organism
Gallus gallus (Chicken)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Cofactori

Mn2+UniRule annotationSAAS annotation

Pathwayi: protein glycosylation

This protein is involved in the pathway protein glycosylation, which is part of Protein modification.UniRule annotationSAAS annotation
View all proteins of this organism that are known to be involved in the pathway protein glycosylation and in Protein modification.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosyltransferaseUniRule annotationSAAS annotation, Transferase

Keywords - Ligandi

LectinUniRule annotationSAAS annotation, ManganeseUniRule annotationSAAS annotation

Enzyme and pathway databases

ReactomeiR-GGA-913709. O-linked glycosylation of mucins.
UniPathwayiUPA00378.

Protein family/group databases

CAZyiCBM13. Carbohydrate-Binding Module Family 13.
GT27. Glycosyltransferase Family 27.

Names & Taxonomyi

Protein namesi
Recommended name:
Polypeptide N-acetylgalactosaminyltransferaseUniRule annotation (EC:2.4.1.-UniRule annotation)
Alternative name(s):
Protein-UDP acetylgalactosaminyltransferaseUniRule annotation
Gene namesi
Name:GALNT6Imported
ORF Names:RCJMB04_1b1Imported
OrganismiGallus gallus (Chicken)Imported
Taxonomic identifieri9031 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeGalliformesPhasianidaePhasianinaeGallus
Proteomesi
  • UP000000539 Componenti: Unassembled WGS sequence

Subcellular locationi

  • Golgi apparatus membrane UniRule annotation; Single-pass type II membrane protein UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Golgi apparatusUniRule annotationSAAS annotation, Membrane

PTM / Processingi

Keywords - PTMi

Disulfide bondUniRule annotationSAAS annotation

Expressioni

Gene expression databases

BgeeiENSGALG00000006665.

Interactioni

Protein-protein interaction databases

STRINGi9031.ENSGALP00000010768.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini505 – 621117Ricin B-type lectinInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the glycosyltransferase 2 family. GalNAc-T subfamily.UniRule annotationSAAS annotation
Contains 1 ricin B-type lectin domain.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSAAS annotation

Phylogenomic databases

eggNOGiKOG3736. Eukaryota.
ENOG410XPMK. LUCA.
GeneTreeiENSGT00760000118828.
HOGENOMiHOG000038227.
HOVERGENiHBG051699.
KOiK00710.
OMAiNQCLDVG.
OrthoDBiEOG091G085O.
PhylomeDBiQ5F4C7.
TreeFamiTF313267.

Family and domain databases

Gene3Di3.90.550.10. 1 hit.
InterProiIPR001173. Glyco_trans_2-like.
IPR029044. Nucleotide-diphossugar_trans.
IPR000772. Ricin_B_lectin.
[Graphical view]
PfamiPF00535. Glycos_transf_2. 1 hit.
PF00652. Ricin_B_lectin. 1 hit.
[Graphical view]
SMARTiSM00458. RICIN. 1 hit.
[Graphical view]
SUPFAMiSSF50370. SSF50370. 1 hit.
SSF53448. SSF53448. 1 hit.
PROSITEiPS50231. RICIN_B_LECTIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5F4C7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRLLRRRYSP LKVALVGAVF LLFLFILQRD VGDGDPREEP WLKNIVDGKD
60 70 80 90 100
QVIDLMLGAV HNLRDSMPKL QIGAPVPPEE PPRSARSCPP GFYTAAELRP
110 120 130 140 150
LLERPPQDPS GPGADGKAFK KEQWTAEESK EKERGYEKHC FNAFASDRIS
160 170 180 190 200
LQRALGPDSR PPECIDQKFK RCPPLPTTSV VIVFHNEAWS TLLRTVYSVL
210 220 230 240 250
HASPAALLRE IILVDDASTD EYLKDELDRY VKQLQIVRVV RQAERKGLIT
260 270 280 290 300
ARLLGASVAS GEVLTFLDAH CECFHGWLEP LLSRIAEEPT AVVSPDITTI
310 320 330 340 350
DLNTFEFSKP VQYGKQHSRG NFDWSLTFGW EVVPPRERQR RKDETVPIKS
360 370 380 390 400
PTFAGGLFAI SRSYFEHIGS YDDQMEIWGG ENVEMSFRVW QCGGQLEIIP
410 420 430 440 450
CSVVGHVFRS KSPHTFPKGT QVISRNQVRL AEVWMDDYKE IFYRRNQQAA
460 470 480 490 500
QMAREKTYGD ITERRRLRER LHCKNFTWYL QNVYPEMFVP DLNPTSYGAI
510 520 530 540 550
KNEGTNSCLD VGENNHGGKP LIMYPCHGMG GNQYFEYTTQ RDLRHNVGKQ
560 570 580 590 600
LCLRAGAGPV QLGECRFRGQ PTRVPPDEEW ELTQDHLIKN HASRMCLTAR
610 620
GKHPAMAPCD PSDPHQLWSF T
Length:621
Mass (Da):70,717
Last modified:March 15, 2005 - v1
Checksum:iE2CA5C65E0B8B022
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AADN03009151 Genomic DNA. No translation available.
AADN03009169 Genomic DNA. No translation available.
AJ851373 mRNA. Translation: CAH65007.1.
RefSeqiNP_001026749.1. NM_001031578.1.
XP_015155855.1. XM_015300369.1.
UniGeneiGga.14747.
Gga.51375.

Genome annotation databases

EnsembliENSGALT00000010782; ENSGALP00000010768; ENSGALG00000006665.
GeneIDi429501.
KEGGigga:429501.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AADN03009151 Genomic DNA. No translation available.
AADN03009169 Genomic DNA. No translation available.
AJ851373 mRNA. Translation: CAH65007.1.
RefSeqiNP_001026749.1. NM_001031578.1.
XP_015155855.1. XM_015300369.1.
UniGeneiGga.14747.
Gga.51375.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9031.ENSGALP00000010768.

Protein family/group databases

CAZyiCBM13. Carbohydrate-Binding Module Family 13.
GT27. Glycosyltransferase Family 27.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSGALT00000010782; ENSGALP00000010768; ENSGALG00000006665.
GeneIDi429501.
KEGGigga:429501.

Organism-specific databases

CTDi11226.

Phylogenomic databases

eggNOGiKOG3736. Eukaryota.
ENOG410XPMK. LUCA.
GeneTreeiENSGT00760000118828.
HOGENOMiHOG000038227.
HOVERGENiHBG051699.
KOiK00710.
OMAiNQCLDVG.
OrthoDBiEOG091G085O.
PhylomeDBiQ5F4C7.
TreeFamiTF313267.

Enzyme and pathway databases

UniPathwayiUPA00378.
ReactomeiR-GGA-913709. O-linked glycosylation of mucins.

Gene expression databases

BgeeiENSGALG00000006665.

Family and domain databases

Gene3Di3.90.550.10. 1 hit.
InterProiIPR001173. Glyco_trans_2-like.
IPR029044. Nucleotide-diphossugar_trans.
IPR000772. Ricin_B_lectin.
[Graphical view]
PfamiPF00535. Glycos_transf_2. 1 hit.
PF00652. Ricin_B_lectin. 1 hit.
[Graphical view]
SMARTiSM00458. RICIN. 1 hit.
[Graphical view]
SUPFAMiSSF50370. SSF50370. 1 hit.
SSF53448. SSF53448. 1 hit.
PROSITEiPS50231. RICIN_B_LECTIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ5F4C7_CHICK
AccessioniPrimary (citable) accession number: Q5F4C7
Secondary accession number(s): H9KZF5
Entry historyi
Integrated into UniProtKB/TrEMBL: March 15, 2005
Last sequence update: March 15, 2005
Last modified: September 7, 2016
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.