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Protein

Polypeptide N-acetylgalactosaminyltransferase

Gene

GALNT6

Organism
Gallus gallus (Chicken)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Cofactori

Mn2+UniRule annotationSAAS annotation

Pathwayi: protein glycosylation

This protein is involved in the pathway protein glycosylation, which is part of Protein modification.UniRule annotationSAAS annotation
View all proteins of this organism that are known to be involved in the pathway protein glycosylation and in Protein modification.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosyltransferaseUniRule annotationSAAS annotation, Transferase
LigandLectinUniRule annotationSAAS annotation, ManganeseUniRule annotationSAAS annotation

Enzyme and pathway databases

ReactomeiR-GGA-913709 O-linked glycosylation of mucins
UniPathwayiUPA00378

Protein family/group databases

CAZyiCBM13 Carbohydrate-Binding Module Family 13
GT27 Glycosyltransferase Family 27

Names & Taxonomyi

Protein namesi
Recommended name:
Polypeptide N-acetylgalactosaminyltransferaseUniRule annotation (EC:2.4.1.-UniRule annotation)
Alternative name(s):
Protein-UDP acetylgalactosaminyltransferaseUniRule annotation
Gene namesi
Name:GALNT6Imported
ORF Names:RCJMB04_1b1Imported
OrganismiGallus gallus (Chicken)Imported
Taxonomic identifieri9031 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeGalliformesPhasianidaePhasianinaeGallus
Proteomesi
  • UP000000539 Componenti: Unplaced

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Golgi apparatusUniRule annotationSAAS annotation, Membrane

PTM / Processingi

Keywords - PTMi

Disulfide bondUniRule annotationSAAS annotation

Expressioni

Gene expression databases

BgeeiENSGALG00000006665

Interactioni

Protein-protein interaction databases

STRINGi9031.ENSGALP00000010768

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini505 – 621Ricin B-type lectinInterPro annotationAdd BLAST117

Sequence similaritiesi

Belongs to the glycosyltransferase 2 family. GalNAc-T subfamily.UniRule annotationSAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSAAS annotation

Phylogenomic databases

eggNOGiKOG3736 Eukaryota
ENOG410XPMK LUCA
GeneTreeiENSGT00760000118828
HOGENOMiHOG000038227
HOVERGENiHBG051699
KOiK00710
OMAiSYFEHIG
OrthoDBiEOG091G085O

Family and domain databases

CDDicd00161 RICIN, 1 hit
Gene3Di3.90.550.10, 1 hit
InterProiView protein in InterPro
IPR001173 Glyco_trans_2-like
IPR029044 Nucleotide-diphossugar_trans
IPR035992 Ricin_B-like_lectins
IPR000772 Ricin_B_lectin
PfamiView protein in Pfam
PF00535 Glycos_transf_2, 1 hit
PF00652 Ricin_B_lectin, 1 hit
SMARTiView protein in SMART
SM00458 RICIN, 1 hit
SUPFAMiSSF50370 SSF50370, 1 hit
SSF53448 SSF53448, 1 hit
PROSITEiView protein in PROSITE
PS50231 RICIN_B_LECTIN, 1 hit

Sequencei

Sequence statusi: Complete.

Q5F4C7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRLLRRRYSP LKVALVGAVF LLFLFILQRD VGDGDPREEP WLKNIVDGKD
60 70 80 90 100
QVIDLMLGAV HNLRDSMPKL QIGAPVPPEE PPRSARSCPP GFYTAAELRP
110 120 130 140 150
LLERPPQDPS GPGADGKAFK KEQWTAEESK EKERGYEKHC FNAFASDRIS
160 170 180 190 200
LQRALGPDSR PPECIDQKFK RCPPLPTTSV VIVFHNEAWS TLLRTVYSVL
210 220 230 240 250
HASPAALLRE IILVDDASTD EYLKDELDRY VKQLQIVRVV RQAERKGLIT
260 270 280 290 300
ARLLGASVAS GEVLTFLDAH CECFHGWLEP LLSRIAEEPT AVVSPDITTI
310 320 330 340 350
DLNTFEFSKP VQYGKQHSRG NFDWSLTFGW EVVPPRERQR RKDETVPIKS
360 370 380 390 400
PTFAGGLFAI SRSYFEHIGS YDDQMEIWGG ENVEMSFRVW QCGGQLEIIP
410 420 430 440 450
CSVVGHVFRS KSPHTFPKGT QVISRNQVRL AEVWMDDYKE IFYRRNQQAA
460 470 480 490 500
QMAREKTYGD ITERRRLRER LHCKNFTWYL QNVYPEMFVP DLNPTSYGAI
510 520 530 540 550
KNEGTNSCLD VGENNHGGKP LIMYPCHGMG GNQYFEYTTQ RDLRHNVGKQ
560 570 580 590 600
LCLRAGAGPV QLGECRFRGQ PTRVPPDEEW ELTQDHLIKN HASRMCLTAR
610 620
GKHPAMAPCD PSDPHQLWSF T
Length:621
Mass (Da):70,717
Last modified:March 15, 2005 - v1
Checksum:iE2CA5C65E0B8B022
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AADN04000542 Genomic DNA No translation available.
AJ851373 mRNA Translation: CAH65007.1
RefSeqiNP_001026749.1, NM_001031578.1
XP_015155855.1, XM_015300369.1
UniGeneiGga.14747
Gga.51375

Genome annotation databases

EnsembliENSGALT00000068087; ENSGALP00000043921; ENSGALG00000041101
GeneIDi429501
KEGGigga:429501

Similar proteinsi

Entry informationi

Entry nameiQ5F4C7_CHICK
AccessioniPrimary (citable) accession number: Q5F4C7
Secondary accession number(s): H9KZF5
Entry historyiIntegrated into UniProtKB/TrEMBL: March 15, 2005
Last sequence update: March 15, 2005
Last modified: March 28, 2018
This is version 109 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health