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Q5F3H1 (Q5F3H1_CHICK) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 71. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:RCJMB04_17b18 EMBL CAH65313.1
OrganismGallus gallus (Chicken) EMBL CAH65313.1
Taxonomic identifier9031 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiTestudines + Archosauria groupArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalliformesPhasianidaePhasianinaeGallus

Protein attributes

Sequence length1249 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

S-adenosyl-L-methionine + L-lysine-[histone] = S-adenosyl-L-homocysteine + N(6)-methyl-L-lysine-[histone]. RuleBase RU004542 SAAS SAAS007728

Subcellular location

Nucleus By similarity RuleBase RU004542.

Sequence similarities

Contains 1 SET domain. RuleBase RU004538

Contains 1 pre-SET domain. RuleBase RU004542

Contains 6 ANK repeats. RuleBase RU003321

Contains SET domain. SAAS SAAS007728

Contains pre-SET domain. SAAS SAAS007728

Sequences

Sequence LengthMass (Da)Tools
Q5F3H1 [UniParc].

Last modified March 15, 2005. Version 1.
Checksum: 7F60EFE4178A344B

FASTA1,249137,491
        10         20         30         40         50         60 
MATVDAEQTV LSKGETRKDA CMKTELLKDI TNNKEEGFNA MAADESATEK QVGEPKMAVD 

        70         80         90        100        110        120 
GETNGSCEHG EAGSHPNPAK NTQDNTKVSQ QDSSTKLNRI AENGISERDG ETGKQNHMKA 

       130        140        150        160        170        180 
NDFTQTSLTG SNGYILTKQM AQEQPLRTTS TFASLTGHAA KTLPGGASKG RTVGTFSQMQ 

       190        200        210        220        230        240 
ATMPTKLGEG SKDMDAKKAT AANAEVKVHR ARKTMPKPTP SLHASKDPKD GRDSRDQKES 

       250        260        270        280        290        300 
KEEGNKNILE FGKPLPLPSL PGLHQSLPQN QSYVATSKSQ TAAAVSRKKK RRMGTYSLVP 

       310        320        330        340        350        360 
KKKTKVLKQR TMIEMFKSIT HSSAGAKSEK ELGDVSPHVN GESIDVDSEE EDSDELEDED 

       370        380        390        400        410        420 
DHGAEQAAAF PADDNRTSKD SASDADNVRK IDDGDSEEEQ ESAESGEDEE DGDESDLSSE 

       430        440        450        460        470        480 
SSIKKKLLKR KGKTDSPWLK PTRKRRRRNK KKQANVLGAE AYKSSLGGRE GSAQDNSMEY 

       490        500        510        520        530        540 
MEVSLDSLDL RVKGILSSQA EGLSNGPEAM EVDGLQEVPL CSCRMETPKS REITTLANNQ 

       550        560        570        580        590        600 
CMATESVDNE GTFMECQPES SISHRFHKSC ASQVNDTSYC PHCGEDASKA KEVTIAKADT 

       610        620        630        640        650        660 
TSTVSLTYEQ QKPAAVEGRA DTTTGSVTGT RLSEEDKPES SAAEGFDLAG SSVFPKPTTS 

       670        680        690        700        710        720 
LTQGPVKETL ESALIALDSE KPKKLRFHPK QLYFSARQGE LQKVLLMLVD GIDPNFKMEH 

       730        740        750        760        770        780 
QSKRTPLHAA AESGHVDICH MLIQAGANID SCSEDQRTPL MEAAENNHLE TVKYLIKAGA 

       790        800        810        820        830        840 
LVDPKDAEGS TCLHLAAKKG HYDVVQYLLS IGKMDVNCQD DGGWTPMIWA TEYKHIELVK 

       850        860        870        880        890        900 
LLLAKGSDIN IRDNEENICL HWAAFSGCVD IAEILLAAKC DLHAVNIHGD SPLHIAAREN 

       910        920        930        940        950        960 
RYECVVLFLS RGSDVTLKNK EGETPLQCSS LNSQVWVALQ MNKTLRESST EKPVQIEKVV 

       970        980        990       1000       1010       1020 
SRDIARGYER IPIPCINSVD SEPCPSNYKY VSQNCVTSPM DIDRNITHLQ YCVCIDDCSS 

      1030       1040       1050       1060       1070       1080 
SNCMCGQLSM RCWYDKDGRL LPEFNMAEPP LIFECNHACS CWRTCRNRVV QNGLRTRLQL 

      1090       1100       1110       1120       1130       1140 
YRTQKMGWGV RTMQDIPLGT FVCEYVGELI SDSEADVREE DSYLFDLDNK DGEVYCIDAR 

      1150       1160       1170       1180       1190       1200 
FYGNISRFIN HLCEPNLIPV RVFMSHQDLR FPRIAFFSTR HIEAGEEIGF DYGDRFWDIK 

      1210       1220       1230       1240 
GKFFSCQCGS PKCKHSSSAL AQMQASTSSQ DTQENGLPDT SSATAAGPF 

« Hide

References

[1]"Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis."
Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J., Fiedler P., Kutter S., Blagodatski A., Kostovska D., Koter M., Plachy J., Carninci P., Hayashizaki Y., Buerstedde J.M.
Genome Biol. 6:R6.1-R6.9(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CB EMBL CAH65313.1.
Tissue: Bursa EMBL CAH65313.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AJ851679 mRNA. Translation: CAH65313.1.
RefSeqNP_001012550.1. NM_001012532.1.
UniGeneGga.1248.

3D structure databases

ProteinModelPortalQ5F3H1.
SMRQ5F3H1. Positions 715-948, 956-1216.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING9031.ENSGALP00000013792.

Proteomic databases

PaxDbQ5F3H1.
PRIDEQ5F3H1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID417250.
KEGGgga:417250.

Organism-specific databases

CTD79813.

Phylogenomic databases

eggNOGCOG0666.
HOGENOMHOG000231216.
HOVERGENHBG028394.
InParanoidQ5F3H1.
KOK11420.

Family and domain databases

Gene3D1.25.40.20. 2 hits.
InterProIPR002110. Ankyrin_rpt.
IPR020683. Ankyrin_rpt-contain_dom.
IPR007728. Pre-SET_dom.
IPR003606. Pre-SET_Zn-bd_sub.
IPR001214. SET_dom.
[Graphical view]
PfamPF00023. Ank. 1 hit.
PF12796. Ank_2. 2 hits.
PF05033. Pre-SET. 1 hit.
PF00856. SET. 1 hit.
[Graphical view]
PRINTSPR01415. ANKYRIN.
SMARTSM00248. ANK. 6 hits.
SM00468. PreSET. 1 hit.
SM00317. SET. 1 hit.
[Graphical view]
SUPFAMSSF48403. SSF48403. 1 hit.
PROSITEPS50297. ANK_REP_REGION. 1 hit.
PS50088. ANK_REPEAT. 5 hits.
PS50867. PRE_SET. 1 hit.
PS50280. SET. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio20820582.
PROQ5F3H1.

Entry information

Entry nameQ5F3H1_CHICK
AccessionPrimary (citable) accession number: Q5F3H1
Entry history
Integrated into UniProtKB/TrEMBL: March 15, 2005
Last sequence update: March 15, 2005
Last modified: February 19, 2014
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)