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Q5EEL8

- DEOD_BACCE

UniProt

Q5EEL8 - DEOD_BACCE

Protein

Purine nucleoside phosphorylase DeoD-type

Gene

deoD

Organism
Bacillus cereus
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 37 (01 Oct 2014)
      Sequence version 2 (14 Apr 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate.UniRule annotation
    Purine deoxynucleoside + phosphate = purine + 2'-deoxy-alpha-D-ribose 1-phosphate.UniRule annotation

    GO - Molecular functioni

    1. purine-nucleoside phosphorylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. purine nucleoside metabolic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Purine nucleoside phosphorylase DeoD-typeUniRule annotation (EC:2.4.2.1UniRule annotation)
    Short name:
    PNPUniRule annotation
    Gene namesi
    Name:deoDUniRule annotation
    OrganismiBacillus cereus
    Taxonomic identifieri1396 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillusBacillus cereus group

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 235235Purine nucleoside phosphorylase DeoD-typePRO_0000063115Add
    BLAST

    Interactioni

    Subunit structurei

    Homohexamer.UniRule annotation

    Structurei

    Secondary structure

    1
    235
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi14 – 185
    Helixi22 – 3211
    Beta strandi34 – 407
    Helixi42 – 443
    Beta strandi47 – 526
    Beta strandi55 – 606
    Helixi66 – 8015
    Beta strandi84 – 9310
    Beta strandi95 – 984
    Beta strandi103 – 11210
    Helixi115 – 1195
    Helixi131 – 14414
    Beta strandi148 – 1558
    Helixi165 – 1728
    Beta strandi177 – 1815
    Helixi182 – 19211
    Beta strandi195 – 20511
    Turni206 – 2083
    Helixi215 – 2173
    Helixi218 – 23215

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3UAVX-ray1.40A1-235[»]
    3UAWX-ray1.20A1-235[»]
    3UAXX-ray1.20A1-235[»]
    3UAYX-ray1.40A1-235[»]
    3UAZX-ray1.40A1-235[»]
    ProteinModelPortaliQ5EEL8.
    SMRiQ5EEL8. Positions 1-234.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the PNP/UDP phosphorylase family.UniRule annotation

    Family and domain databases

    Gene3Di3.40.50.1580. 1 hit.
    HAMAPiMF_01627. Pur_nucleosid_phosp.
    InterProiIPR004402. DeoD-type.
    IPR018017. Nucleoside_phosphorylase.
    IPR018016. Nucleoside_phosphorylase_CS.
    IPR000845. Nucleoside_phosphorylase_d.
    [Graphical view]
    PANTHERiPTHR21234. PTHR21234. 1 hit.
    PfamiPF01048. PNP_UDP_1. 1 hit.
    [Graphical view]
    SUPFAMiSSF53167. SSF53167. 1 hit.
    TIGRFAMsiTIGR00107. deoD. 1 hit.
    PROSITEiPS01232. PNP_UDP_1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q5EEL8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSVHIEAKQG EIAESILLPG DPLRAKYIAE TFLEDVTCYN NVRGMLGFTG    50
    TYKGKRVSVQ GTGMGVPSIS IYVNELIQSY GVKNLIRVGT CGAIQKDVKV 100
    RDVIIAMTAC TDSNMNRLTF PGFDFAPAAN FDLLKKAYDA GTEKGLHVRV 150
    GNVLTADVFY RESMDMVKKL GDYGVLAVEM ETTALYTLAA KYGVNALSVL 200
    TVSDHIFTGE ETTSEERQTT FNEMIEIALD AAIQQ 235
    Length:235
    Mass (Da):25,675
    Last modified:April 14, 2009 - v2
    Checksum:i41A138A380CA3C31
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY900166 Genomic DNA. Translation: AAW82755.2.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY900166 Genomic DNA. Translation: AAW82755.2 .

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3UAV X-ray 1.40 A 1-235 [» ]
    3UAW X-ray 1.20 A 1-235 [» ]
    3UAX X-ray 1.20 A 1-235 [» ]
    3UAY X-ray 1.40 A 1-235 [» ]
    3UAZ X-ray 1.40 A 1-235 [» ]
    ProteinModelPortali Q5EEL8.
    SMRi Q5EEL8. Positions 1-234.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Family and domain databases

    Gene3Di 3.40.50.1580. 1 hit.
    HAMAPi MF_01627. Pur_nucleosid_phosp.
    InterProi IPR004402. DeoD-type.
    IPR018017. Nucleoside_phosphorylase.
    IPR018016. Nucleoside_phosphorylase_CS.
    IPR000845. Nucleoside_phosphorylase_d.
    [Graphical view ]
    PANTHERi PTHR21234. PTHR21234. 1 hit.
    Pfami PF01048. PNP_UDP_1. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53167. SSF53167. 1 hit.
    TIGRFAMsi TIGR00107. deoD. 1 hit.
    PROSITEi PS01232. PNP_UDP_1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Cloning and expression of adenosine phosphorylase of Bacillus cereus NCIB 8122."
      Frassetto L., Rinaldo-Matthis A., Allegrini S., Carta M.C., Tozzi M.G., Sgarrella F.
      Submitted (JAN-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: ATCC 10702 / DSM 487 / IFO 3466 / NCIMB 8122 / NCTC 8035.
    2. Frassetto L., Allegrini S., Sgarrella F.
      Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: SEQUENCE REVISION TO 16.

    Entry informationi

    Entry nameiDEOD_BACCE
    AccessioniPrimary (citable) accession number: Q5EEL8
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 10, 2006
    Last sequence update: April 14, 2009
    Last modified: October 1, 2014
    This is version 37 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3