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Q5EEL8

- DEOD_BACCE

UniProt

Q5EEL8 - DEOD_BACCE

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Protein

Purine nucleoside phosphorylase DeoD-type

Gene

deoD

Organism
Bacillus cereus
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli

Functioni

Catalytic activityi

Purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate.UniRule annotation
Purine deoxynucleoside + phosphate = purine + 2'-deoxy-alpha-D-ribose 1-phosphate.UniRule annotation

GO - Molecular functioni

  1. purine-nucleoside phosphorylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. purine nucleoside metabolic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Names & Taxonomyi

Protein namesi
Recommended name:
Purine nucleoside phosphorylase DeoD-typeUniRule annotation (EC:2.4.2.1UniRule annotation)
Short name:
PNPUniRule annotation
Gene namesi
Name:deoDUniRule annotation
OrganismiBacillus cereus
Taxonomic identifieri1396 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillusBacillus cereus group

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 235235Purine nucleoside phosphorylase DeoD-typePRO_0000063115Add
BLAST

Interactioni

Subunit structurei

Homohexamer.UniRule annotation

Structurei

Secondary structure

1
235
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi14 – 185Combined sources
Helixi22 – 3211Combined sources
Beta strandi34 – 407Combined sources
Helixi42 – 443Combined sources
Beta strandi47 – 526Combined sources
Beta strandi55 – 606Combined sources
Helixi66 – 8015Combined sources
Beta strandi84 – 9310Combined sources
Beta strandi95 – 984Combined sources
Beta strandi103 – 11210Combined sources
Helixi115 – 1195Combined sources
Helixi131 – 14414Combined sources
Beta strandi148 – 1558Combined sources
Helixi165 – 1728Combined sources
Beta strandi177 – 1815Combined sources
Helixi182 – 19211Combined sources
Beta strandi195 – 20511Combined sources
Turni206 – 2083Combined sources
Helixi215 – 2173Combined sources
Helixi218 – 23215Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3UAVX-ray1.40A1-235[»]
3UAWX-ray1.20A1-235[»]
3UAXX-ray1.20A1-235[»]
3UAYX-ray1.40A1-235[»]
3UAZX-ray1.40A1-235[»]
ProteinModelPortaliQ5EEL8.
SMRiQ5EEL8. Positions 1-234.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the PNP/UDP phosphorylase family.UniRule annotation

Family and domain databases

Gene3Di3.40.50.1580. 1 hit.
HAMAPiMF_01627. Pur_nucleosid_phosp.
InterProiIPR004402. DeoD-type.
IPR018017. Nucleoside_phosphorylase.
IPR018016. Nucleoside_phosphorylase_CS.
IPR000845. Nucleoside_phosphorylase_d.
[Graphical view]
PANTHERiPTHR21234. PTHR21234. 1 hit.
PfamiPF01048. PNP_UDP_1. 1 hit.
[Graphical view]
SUPFAMiSSF53167. SSF53167. 1 hit.
TIGRFAMsiTIGR00107. deoD. 1 hit.
PROSITEiPS01232. PNP_UDP_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5EEL8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSVHIEAKQG EIAESILLPG DPLRAKYIAE TFLEDVTCYN NVRGMLGFTG
60 70 80 90 100
TYKGKRVSVQ GTGMGVPSIS IYVNELIQSY GVKNLIRVGT CGAIQKDVKV
110 120 130 140 150
RDVIIAMTAC TDSNMNRLTF PGFDFAPAAN FDLLKKAYDA GTEKGLHVRV
160 170 180 190 200
GNVLTADVFY RESMDMVKKL GDYGVLAVEM ETTALYTLAA KYGVNALSVL
210 220 230
TVSDHIFTGE ETTSEERQTT FNEMIEIALD AAIQQ
Length:235
Mass (Da):25,675
Last modified:April 14, 2009 - v2
Checksum:i41A138A380CA3C31
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY900166 Genomic DNA. Translation: AAW82755.2.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY900166 Genomic DNA. Translation: AAW82755.2 .

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3UAV X-ray 1.40 A 1-235 [» ]
3UAW X-ray 1.20 A 1-235 [» ]
3UAX X-ray 1.20 A 1-235 [» ]
3UAY X-ray 1.40 A 1-235 [» ]
3UAZ X-ray 1.40 A 1-235 [» ]
ProteinModelPortali Q5EEL8.
SMRi Q5EEL8. Positions 1-234.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

Gene3Di 3.40.50.1580. 1 hit.
HAMAPi MF_01627. Pur_nucleosid_phosp.
InterProi IPR004402. DeoD-type.
IPR018017. Nucleoside_phosphorylase.
IPR018016. Nucleoside_phosphorylase_CS.
IPR000845. Nucleoside_phosphorylase_d.
[Graphical view ]
PANTHERi PTHR21234. PTHR21234. 1 hit.
Pfami PF01048. PNP_UDP_1. 1 hit.
[Graphical view ]
SUPFAMi SSF53167. SSF53167. 1 hit.
TIGRFAMsi TIGR00107. deoD. 1 hit.
PROSITEi PS01232. PNP_UDP_1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Cloning and expression of adenosine phosphorylase of Bacillus cereus NCIB 8122."
    Frassetto L., Rinaldo-Matthis A., Allegrini S., Carta M.C., Tozzi M.G., Sgarrella F.
    Submitted (JAN-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 10702 / DSM 487 / IFO 3466 / NCIMB 8122 / NCTC 8035.
  2. Frassetto L., Allegrini S., Sgarrella F.
    Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: SEQUENCE REVISION TO 16.

Entry informationi

Entry nameiDEOD_BACCE
AccessioniPrimary (citable) accession number: Q5EEL8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 10, 2006
Last sequence update: April 14, 2009
Last modified: November 26, 2014
This is version 38 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3