Q5EC54 (Q5EC54_HUMAN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Heterogeneous nuclear ribonucleoprotein K transcript variant EMBL AAW84289.1

Gene names

Name:

HNRPK EMBL AAW84289.1

Organism

Homo sapiens (Human) EMBL AAW84289.1

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo

Protein attributes

Sequence length	464 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 3 KH domains. RuleBase RU003302

Ontologies

Keywords
Cellular component	Virion
Ligand	Viral nucleoprotein EMBL AAW84289.1
Molecular function	Ribonucleoprotein EMBL AAW84289.1
Gene Ontology (GO)
Cellular_component	ribonucleoprotein complex Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5EC54 [UniParc]. Last modified March 15, 2005. Version 1. Checksum: 0E4FCE5EE788EF06	FASTA	464	51,058
	10 20 30 40 50 60 METEQPEETF PNTETNGEFG KRPAEDMEEE QAFKRSRNTD EMVELRILLQ SKNAGAVIGK 70 80 90 100 110 120 GGKNIKALRT DYNASVSVPD SSGPERILSI STDIETIGEI LKKIIPTLEE GLQLPSPTAT 130 140 150 160 170 180 SQLPLESDAV ECLNYQHYKG SDFDCELRLL IHQSLAGGII GVKGAKIKEL RENTQTTIKL 190 200 210 220 230 240 FQECCPHSTD RVVLIGGKPD RVVECIKIIL DLISESPIKG RAQPYDPNFY DETYDYGGFT 250 260 270 280 290 300 MMFDDRRGRP VGFPMRGRGG FDRMPPGRGG RPMPPSRRDY DDMSPRRGPP PPPPGRGGRG 310 320 330 340 350 360 GSRARNLPLP PPPPPRGGDL MAYDRRGRPG DRYDGMVGFS ADETWDSAID TWSPSEWQMA 370 380 390 400 410 420 YEPQGGSGYD YSYAGGRGSY GDLGGPIITT QVTIPKDLAG SIIGKGGQRI KQIRHESGAS 430 440 450 460 IKIDEPLEGS EDRIITITGT QDQIQNAQYL LQNSVKQYAD VEGF

References

[1]	"Cancer-related editing of hnRPK protein mRNA in mucosa of the colon." Klimek-Tomczak K., Mikula M., Dzwonek A., Paziewska A., Hennig E., Ostrowski J. Submitted (JAN-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Tissue: Colorectal cancer and surrounding mucosa EMBL AAW84289.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AY911506 mRNA. Translation: AAW84289.1.
IPI	IPI00216746.
UniGene	Hs.522257.
3D structure databases
ProteinModelPortal	Q5EC54.
SMR	Q5EC54. Positions 385-457.
ModBase	Search...
Protein-protein interaction databases
STRING	Q5EC54.
Proteomic databases
PRIDE	Q5EC54.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Phylogenomic databases
HOGENOM	HOG000019764.
HOVERGEN	HBG051916.
Gene expression databases
ArrayExpress	Q5EC54.
Family and domain databases
InterPro	IPR004087. KH_dom. IPR004088. KH_dom_type_1. IPR012987. ROK_N. [Graphical view]
Pfam	PF00013. KH_1. 3 hits. PF08067. ROKNT. 1 hit. [Graphical view]
SMART	SM00322. KH. 3 hits. [Graphical view]
PROSITE	PS50084. KH_TYPE_1. 3 hits. [Graphical view]
ProtoNet	Search...
Other
ChiTaRS	HNRNPK. human.

Entry information

Entry name

Q5EC54_HUMAN

Accession

Primary (citable) accession number: Q5EC54

Entry history

Integrated into UniProtKB/TrEMBL:	March 15, 2005
Last sequence update:	March 15, 2005
Last modified:	March 6, 2013
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.