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Protein
Submitted name:

Tripartite motif-containing 28

Gene

Trim28

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Tripartite motif-containing 28Imported
Gene namesi
Name:Trim28Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:109274. Trim28.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Expressioni

Gene expression databases

BgeeiENSMUSG00000005566.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000005705.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini66 – 122RING-typeInterPro annotationAdd BLAST57
Domaini149 – 196B box-typeInterPro annotationAdd BLAST48
Domaini205 – 246B box-typeInterPro annotationAdd BLAST42
Domaini625 – 672PHD-typeInterPro annotationAdd BLAST48

Keywords - Domaini

Zinc-fingerSAAS annotation

Phylogenomic databases

eggNOGiENOG410ITES. Eukaryota.
ENOG41102KI. LUCA.
HOVERGENiHBG055353.
KOiK08882.
OMAiRTSIRQV.
OrthoDBiEOG091G01KK.

Family and domain databases

Gene3Di1.20.920.10. 1 hit.
3.30.40.10. 2 hits.
4.10.45.10. 1 hit.
InterProiIPR003649. Bbox_C.
IPR001487. Bromodomain.
IPR019786. Zinc_finger_PHD-type_CS.
IPR000315. Znf_B-box.
IPR011011. Znf_FYVE_PHD.
IPR001965. Znf_PHD.
IPR019787. Znf_PHD-finger.
IPR001841. Znf_RING.
IPR013083. Znf_RING/FYVE/PHD.
[Graphical view]
PfamiPF00628. PHD. 1 hit.
PF00643. zf-B_box. 2 hits.
PF14634. zf-RING_5. 1 hit.
[Graphical view]
SMARTiSM00502. BBC. 1 hit.
SM00336. BBOX. 2 hits.
SM00297. BROMO. 1 hit.
SM00249. PHD. 1 hit.
SM00184. RING. 2 hits.
[Graphical view]
SUPFAMiSSF57903. SSF57903. 1 hit.
PROSITEiPS50119. ZF_BBOX. 2 hits.
PS01359. ZF_PHD_1. 1 hit.
PS50016. ZF_PHD_2. 1 hit.
PS50089. ZF_RING_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5EBP9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAASAAATAA ASAATAASAA SGSPGSGEGS AGGEKRPAAS SAAAASAAAS
60 70 80 90 100
SPAGGGGEAQ ELLEHCGVCR ERLRPERDPR LLPCLHSACS ACLGPATPAA
110 120 130 140 150
ANNSGDGGSA GDGAMVDCPV CKQQCYSKDI VENYFMRDSG SKASSDSQDA
160 170 180 190 200
NQCCTSCEDN APATSYCVEC SEPLCETCVE AHQRVKYTKD HTVRSTGPAK
210 220 230 240 250
TRDGERTVYC NVHKHEPLVL FCESCDTLTC RDCQLNAHKD HQYQFLEDAV
260 270 280 290 300
RNQRKLLASL VKRLGDKHAT LQKNTKEVRS SIRQVSDVQK RVQVDVKMAI
310 320 330 340 350
LQIMKELNKR GRVLVNDAQK VTEGQQERLE RQHWTMTKIQ KHQEHILRFA
360 370 380 390 400
SWALESDNNT ALLLSKKLIY FQLHRALKMI VDPVEPHGEM KFQWDLNAWT
410 420 430 440 450
KSAEAFGKIV AERPGTNSTG PGPMAPPRAP GPLSKQGSGS SQPMEVQEGY
460 470 480 490 500
GFGSDDPYSS AEPHVSGMKR SRSGEGEVSG LLRKVPRVSL ERLDLDLTSD
510 520 530 540 550
SQPPVFKVFP GSTTEDYNLI VIERGAAAAA AGQAGTVPPG APGAPPLPGM
560 570 580 590 600
AIVKEEETEA AIGAPPAAPE GPETKPVLMP LTEGPGAEGP RLASPSGSTS
610 620 630 640 650
SGLEVVAPEV TSAPVSGPGI LDDSATICRV CQKPGDLVMC NQCEFCFHLD
660 670 680 690 700
CHLPALQDVP GEEWSCSLCH VLPDLKEEDG SLSLDGADST GVVAKLSPAN
710 720 730 740 750
QRKCERVLLA LFCHEPCRPL HQLATDSTFS MEQPGGTLDL TLIRARLQEK
760 770 780 790 800
LSPPYSSPQE FAQDVGRMFK QFNKLTEDKA DVQSIIGLQR FFETRMNDAF
810 820 830
GDTKFSAVLV EPPPLNLPSA GLSSQELSGP GDGP
Length:834
Mass (Da):88,847
Last modified:May 10, 2005 - v1
Checksum:iDE87AAA5DC67BB8B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC089337 mRNA. Translation: AAH89337.1.
AK141357 mRNA. Translation: BAE24661.1.
RefSeqiNP_035718.2. NM_011588.3.
UniGeneiMm.15701.
Mm.398345.

Genome annotation databases

GeneIDi21849.
KEGGimmu:21849.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC089337 mRNA. Translation: AAH89337.1.
AK141357 mRNA. Translation: BAE24661.1.
RefSeqiNP_035718.2. NM_011588.3.
UniGeneiMm.15701.
Mm.398345.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000005705.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi21849.
KEGGimmu:21849.

Organism-specific databases

CTDi10155.
MGIiMGI:109274. Trim28.

Phylogenomic databases

eggNOGiENOG410ITES. Eukaryota.
ENOG41102KI. LUCA.
HOVERGENiHBG055353.
KOiK08882.
OMAiRTSIRQV.
OrthoDBiEOG091G01KK.

Miscellaneous databases

ChiTaRSiTrim28. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000005566.

Family and domain databases

Gene3Di1.20.920.10. 1 hit.
3.30.40.10. 2 hits.
4.10.45.10. 1 hit.
InterProiIPR003649. Bbox_C.
IPR001487. Bromodomain.
IPR019786. Zinc_finger_PHD-type_CS.
IPR000315. Znf_B-box.
IPR011011. Znf_FYVE_PHD.
IPR001965. Znf_PHD.
IPR019787. Znf_PHD-finger.
IPR001841. Znf_RING.
IPR013083. Znf_RING/FYVE/PHD.
[Graphical view]
PfamiPF00628. PHD. 1 hit.
PF00643. zf-B_box. 2 hits.
PF14634. zf-RING_5. 1 hit.
[Graphical view]
SMARTiSM00502. BBC. 1 hit.
SM00336. BBOX. 2 hits.
SM00297. BROMO. 1 hit.
SM00249. PHD. 1 hit.
SM00184. RING. 2 hits.
[Graphical view]
SUPFAMiSSF57903. SSF57903. 1 hit.
PROSITEiPS50119. ZF_BBOX. 2 hits.
PS01359. ZF_PHD_1. 1 hit.
PS50016. ZF_PHD_2. 1 hit.
PS50089. ZF_RING_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ5EBP9_MOUSE
AccessioniPrimary (citable) accession number: Q5EBP9
Entry historyi
Integrated into UniProtKB/TrEMBL: May 10, 2005
Last sequence update: May 10, 2005
Last modified: November 30, 2016
This is version 114 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.