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Protein
Submitted name:

Heterogeneous nuclear ribonucleoprotein A1

Gene

Hnrnpa1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoproteinImported, RNA-bindingPROSITE-ProRule annotation, Viral nucleoproteinImported

Names & Taxonomyi

Protein namesi
Submitted name:
Heterogeneous nuclear ribonucleoprotein A1Imported
Gene namesi
Name:Hnrnpa1Imported
Synonyms:Hnrpa1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 15

Organism-specific databases

MGIiMGI:104820 Hnrnpa1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Virion

PTM / Processingi

Proteomic databases

TopDownProteomicsiQ5EBP8

Expressioni

Gene expression databases

BgeeiENSMUSG00000046434

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000042658

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini14 – 97RRMInterPro annotationAdd BLAST84
Domaini105 – 184RRMInterPro annotationAdd BLAST80

Phylogenomic databases

eggNOGiKOG0118 Eukaryota
COG0724 LUCA
GeneTreeiENSGT00900000140828
HOVERGENiHBG002295
OMAiQDEHTID
OrthoDBiEOG091G1CPI
TreeFamiTF314808

Family and domain databases

CDDicd12761 RRM1_hnRNPA1, 1 hit
cd12580 RRM2_hnRNPA1, 1 hit
Gene3Di3.30.70.330, 2 hits
InterProiView protein in InterPro
IPR021662 HnRNPA1
IPR034845 hnRNPA1_RRM1
IPR034803 hnRNPA1_RRM2
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF11627 HnRNPA1, 1 hit
PF00076 RRM_1, 2 hits
SMARTiView protein in SMART
SM00360 RRM, 2 hits
SUPFAMiSSF54928 SSF54928, 2 hits
PROSITEiView protein in PROSITE
PS50102 RRM, 2 hits

Sequencei

Sequence statusi: Complete.

Q5EBP8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKSESPKEP EQLRKLFIGG LSFETTDESL RSHFEQWGTL TDCVVMRDPN
60 70 80 90 100
TKRSRGFGFV TYATVEEVDA AMNARPHKVD GRVVEPKRAV SREDSQRPGA
110 120 130 140 150
HLTVKKIFVG GIKEDTEEHH LRDYFEQYGK IEVIEIMTDR GSGKKRGFAF
160 170 180 190 200
VTFDDHDSVD KIVIQKYHTV NGHNCEVRKA LSKQEMASAS SSQRGRSGSG
210 220 230 240 250
NFGGGRGGGF GGNDNFGRGG NFSGRGGFGG SRGGGGYGGS GDGYNGFGND
260 270 280 290 300
GGYGGGSPGY SGGSRGYGSG GQGYGNQGSG YGGSGSYDSY NNGGGGGGFG
310 320 330 340 350
GGSGSNFGGG GSYNDFGNYN NQSSNFGPMK GGNFGGRSSG PYGGGGQYFA
360 370
KPRNQGGYGG SSSSSSYGSG RRF
Length:373
Mass (Da):38,834
Last modified:March 15, 2005 - v1
Checksum:i7FF82F613E0595BC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC164069 Genomic DNA No translation available.
BC089340 mRNA Translation: AAH89340.1
BC092395 mRNA Translation: AAH92395.1
AK146630 mRNA Translation: BAE27318.1
AK166989 mRNA Translation: BAE39169.1
AK168733 mRNA Translation: BAE40574.1
RefSeqiNP_001034218.1, NM_001039129.4
UniGeneiMm.237064
Mm.432031

Genome annotation databases

EnsembliENSMUST00000036004; ENSMUSP00000042658; ENSMUSG00000046434
GeneIDi15382
UCSCiuc007xxr.2 mouse

Similar proteinsi

Entry informationi

Entry nameiQ5EBP8_MOUSE
AccessioniPrimary (citable) accession number: Q5EBP8
Entry historyiIntegrated into UniProtKB/TrEMBL: March 15, 2005
Last sequence update: March 15, 2005
Last modified: May 23, 2018
This is version 123 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
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Main funding by: National Institutes of Health