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Q5EBP3 (ARMC5_MOUSE) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Armadillo repeat-containing protein 5
Gene names
Name:Armc5
OrganismMus musculus (Mouse) [Reference proteome]
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length926 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 7 ARM repeats.

Contains 1 BTB (POZ) domain.

Sequence caution

The sequence BAC26726.1 differs from that shown. Reason: Erroneous initiation.

The sequence BAD21361.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
   DomainRepeat
   PTMPhosphoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 926926Armadillo repeat-containing protein 5
PRO_0000284406

Regions

Repeat139 – 17941ARM 1
Repeat181 – 22141ARM 2
Repeat223 – 26341ARM 3
Repeat267 – 30640ARM 4
Repeat307 – 35448ARM 5
Repeat355 – 39945ARM 6
Repeat401 – 44040ARM 7
Domain745 – 81369BTB
Compositional bias328 – 3314Poly-Arg

Amino acid modifications

Modified residue3371Phosphoserine By similarity

Sequences

Sequence LengthMass (Da)Tools
Q5EBP3 [UniParc].

Last modified March 15, 2005. Version 1.
Checksum: E8475D8244BFC648

FASTA92696,728
        10         20         30         40         50         60 
MAAARPALTD SLSFCLAQLT AAAGEGPGGG KDPATNETPL GRALLALRTR HIKAAEGIER 

        70         80         90        100        110        120 
FRARGGLRPL LALLRRTAAA GPAPSQAASG SAPSSVASAG STPGHAPAAE SLLTPSLPMR 

       130        140        150        160        170        180 
LRKTLDLALS ILANCCTEGA CRAEVRRLGG ILPLVTILQC VKTDSIQNRT ARALGNLAME 

       190        200        210        220        230        240 
PESCRDIHSA GAVPFLVESL TACQDSQCLQ SIVRALRNLA DSPQHRLALA QQGAVRPLAE 

       250        260        270        280        290        300 
LLATAPDPAL TAALVRALLE LSRGCSRACA EQLSLGGALG PLVSLASHPK RAIREAAILI 

       310        320        330        340        350        360 
LANLCAQGLV RPALGNAGGV EVLLGELRRR RSPGGSSSAT QQPLVRAVCL LCREAINRAR 

       370        380        390        400        410        420 
LRDAGGLELL MGLLQDPGAS AWHPRVVAAL VGFLYDTGAL GKLQALGLVP LLARQLCGEA 

       430        440        450        460        470        480 
GEEEEEGIEA ASWDFPEERT SGQAEGGSFR SLRLWLISEG YAAGPGDISP DWSPERCPMP 

       490        500        510        520        530        540 
EPSESVSPTP GQTSMSTPRT LRKPGRIPAA TPEEPWGQEG PALLLLSRFS QAPDPSGALV 

       550        560        570        580        590        600 
TGPALCGLLA YVTGAPGPPN PRALRILARL TCNPACLEAF VRTYGAALLR AWLVLGVSPD 

       610        620        630        640        650        660 
DWPVPHARPV HRSQHRELGE MLLQNLTVQA ESPFGVGALT HLLLSGSPED RVACALTLPF 

       670        680        690        700        710        720 
ICRKPTLWRR LLLDQGGLRL LLTALTQPAP HPLFLFFAAD SLSCLQGLVS PTASPVPLPA 

       730        740        750        760        770        780 
LPLELDSPPP CLYEPLLGPA PAPAPDLHFV LDSGLQLPAQ RAASAAASPF FRALLSGSFA 

       790        800        810        820        830        840 
EAQMDLVPLR GLSPGAAWPV LHHLHGCRGC GAALGPVPPP GQPLLGSKAE EALEAAGRFL 

       850        860        870        880        890        900 
LPALEEELEE AVGRIHLSPR GGPESVGEVF RLGRPRLAAH CARWTLEPGQ CPRKRALALT 

       910        920 
GLVEAAGEEA GPLTEALLAV VMGIES

« Hide

References

[1]"Prediction of the coding sequences of mouse homologues of FLJ genes: the complete nucleotide sequences of 110 mouse FLJ-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries."
Okazaki N., Kikuno R., Ohara R., Inamoto S., Koseki H., Hiraoka S., Saga Y., Kitamura H., Nakagawa T., Nagase T., Ohara O., Koga H.
DNA Res. 11:127-135(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Embryonic tail.
[2]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: C57BL/6 and FVB/N-3.
Tissue: Brain and Mammary tumor.
[3]"The transcriptional landscape of the mammalian genome."
Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J. expand/collapse author list , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 126-926.
Strain: C57BL/6J.
Tissue: Testis.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AK131111 mRNA. Translation: BAD21361.1. Different initiation.
BC025196 mRNA. Translation: AAH25196.1.
BC089363 mRNA. Translation: AAH89363.1.
AK030000 mRNA. Translation: BAC26726.1. Different initiation.
IPIIPI00421036.
RefSeqNP_666317.2. NM_146205.2.
UniGeneMm.475117.

3D structure databases

ProteinModelPortalQ5EBP3.
SMRQ5EBP3. Positions 55-394, 635-708.
ModBaseSearch...

PTM databases

PhosphoSiteQ5EBP3.

Proteomic databases

PRIDEQ5EBP3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000044660; ENSMUSP00000040568; ENSMUSG00000042178.
GeneID233912.
KEGGmmu:233912.
UCSCuc009jyk.1. mouse.

Organism-specific databases

CTD79798.
MGIMGI:2384586. Armc5.

Phylogenomic databases

eggNOGNOG39191.
GeneTreeENSGT00390000009109.
HOGENOMHOG000034055.
HOVERGENHBG055351.
InParanoidQ5EBP3.
OMAVTILQCV.
OrthoDBEOG4W3SMH.

Gene expression databases

BgeeQ5EBP3.
CleanExMM_ARMC5.
GenevestigatorQ5EBP3.

Family and domain databases

Gene3D1.25.10.10. 4 hits.
3.30.710.10. 1 hit.
InterProIPR011989. ARM-like.
IPR016024. ARM-type_fold.
IPR000225. Armadillo.
IPR000210. BTB/POZ-like.
IPR011333. BTB/POZ_fold.
[Graphical view]
SMARTSM00185. ARM. 4 hits.
[Graphical view]
SUPFAMSSF48371. ARM-type_fold. 1 hit.
PROSITEPS50176. ARM_REPEAT. False negative.
PS50097. BTB. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio381955.
SOURCESearch...

Entry information

Entry nameARMC5_MOUSE
AccessionPrimary (citable) accession number: Q5EBP3
Secondary accession number(s): Q6KAU6, Q8CDI5, Q8R3J0
Entry history
Integrated into UniProtKB/Swiss-Prot: April 17, 2007
Last sequence update: March 15, 2005
Last modified: May 1, 2013
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

MGD cross-references

Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot

SIMILARITY comments

Index of protein domains and families

to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents