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Q5EB85 (Q5EB85_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Rbbp6 protein EMBL AAH89931.1
Gene names
Name:Rbbp6 EMBL AAH89931.1 RGD 1311964
OrganismRattus norvegicus (Rat) EMBL AAH89931.1
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length223 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AAH89931.1

Sequences

Sequence LengthMass (Da)Tools
Q5EB85 [UniParc].

Last modified March 15, 2005. Version 1.
Checksum: E51460CF52AF457C

FASTA22324,445
        10         20         30         40         50         60 
REKHAAEASR NGKESSGSKL PSIPNPPDPP MEKELAAGQI EKSTIKPKPQ LSHSSRLSSD 

        70         80         90        100        110        120 
LTRETDEAAF EPDYNESDSE SNVSVKEEEA VASVSKDLKE KATEKATESL NVATASQPGA 

       130        140        150        160        170        180 
DRSQSQSSPS VSPSRSHSPS GSQTRSHSSS ASSAESQDSK KKKKKKDKKK HKKHKKHKKH 

       190        200        210        220 
KKHAGVDGDV EKSQKHKHKK KKAKKNKDKE KEKDDQKVKS VTV

« Hide

References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. expand/collapse author list , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Ovary EMBL AAH89931.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BC089931 mRNA. Translation: AAH89931.1.
IPIIPI00560544.
UniGeneRn.95305.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING10116.ENSRNOP00000036139.
Q5EB85.

PTM databases

PhosphoSiteQ5EB85.

Proteomic databases

PaxDbQ5EB85.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

UCSCRGD:1311964. rat.

Organism-specific databases

RGD1311964. Rbbp6.

Phylogenomic databases

eggNOGCOG5222.
HOGENOMHOG000154075.
InParanoidQ5EB85.
OrthoDBEOG44TP8G.

Gene expression databases

ArrayExpressQ5EB85.
GenevestigatorQ5EB85.

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameQ5EB85_RAT
AccessionPrimary (citable) accession number: Q5EB85
Entry history
Integrated into UniProtKB/TrEMBL: March 15, 2005
Last sequence update: March 15, 2005
Last modified: April 3, 2013
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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