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Protein
Submitted name:

MGC108224 protein

Gene

fdps

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

TransferaseUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
MGC108224 proteinImported
Gene namesi
Name:fdpsImported
Synonyms:MGC108224Imported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana

Organism-specific databases

XenbaseiXB-GENE-6456603. fdps.

Structurei

3D structure databases

ProteinModelPortaliQ5EAL0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the FPP/GGPP synthase family.UniRule annotation

Phylogenomic databases

HOVERGENiHBG005741.
KOiK00787.

Family and domain databases

Gene3Di1.10.600.10. 1 hit.
InterProiIPR008949. Isoprenoid_synthase_dom.
IPR000092. Polyprenyl_synt.
IPR033749. Polyprenyl_synt_CS.
[Graphical view]
PfamiPF00348. polyprenyl_synt. 1 hit.
[Graphical view]
SUPFAMiSSF48576. SSF48576. 1 hit.
PROSITEiPS00723. POLYPRENYL_SYNTHASE_1. 1 hit.
PS00444. POLYPRENYL_SYNTHASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5EAL0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNSHAGSERQ EFSSYFEQIV QDLTAEDSGH PEVGDAITRL KEVLEYNTPG
60 70 80 90 100
GKCNRGVTVL ASYKELVGPE LHKDGNLQRA LAVGWCVELL QAFFLVADDI
110 120 130 140 150
MDNSVTRRGQ PCWYRKEGVG LDAVNDSFLL EASIYRILRK YCRGKPYYLS
160 170 180 190 200
LLELFLETSY QTELGQALDL ITAQPGKVDL NRYTEKRYKA IVKYKTAFYS
210 220 230 240 250
FYLPVAAAMY MAGIAGEAEH TNARTILLEM GEFFQIQDDY LDCYGDPSVT
260 270 280 290 300
GKIGTDIQDN KCGWLVVEAL KRVSPEQRRL LQENYGREEP ERVQRVKQLY
310 320 330 340
EELDMAAVYA RHEEESYQRL QLLISQHAHS LSREIFLALA RKIYKRQK
Length:348
Mass (Da):39,903
Last modified:March 15, 2005 - v1
Checksum:i1C488184A1880B0D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC090384 mRNA. Translation: AAH90384.1.
BC128625 mRNA. Translation: AAI28626.1.
RefSeqiNP_001015867.1. NM_001015867.1.
UniGeneiStr.28292.

Genome annotation databases

GeneIDi548584.
KEGGixtr:548584.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC090384 mRNA. Translation: AAH90384.1.
BC128625 mRNA. Translation: AAI28626.1.
RefSeqiNP_001015867.1. NM_001015867.1.
UniGeneiStr.28292.

3D structure databases

ProteinModelPortaliQ5EAL0.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi548584.
KEGGixtr:548584.

Organism-specific databases

CTDi2224.
XenbaseiXB-GENE-6456603. fdps.

Phylogenomic databases

HOVERGENiHBG005741.
KOiK00787.

Family and domain databases

Gene3Di1.10.600.10. 1 hit.
InterProiIPR008949. Isoprenoid_synthase_dom.
IPR000092. Polyprenyl_synt.
IPR033749. Polyprenyl_synt_CS.
[Graphical view]
PfamiPF00348. polyprenyl_synt. 1 hit.
[Graphical view]
SUPFAMiSSF48576. SSF48576. 1 hit.
PROSITEiPS00723. POLYPRENYL_SYNTHASE_1. 1 hit.
PS00444. POLYPRENYL_SYNTHASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ5EAL0_XENTR
AccessioniPrimary (citable) accession number: Q5EAL0
Entry historyi
Integrated into UniProtKB/TrEMBL: March 15, 2005
Last sequence update: March 15, 2005
Last modified: November 30, 2016
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.