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Q5E9E3 (C1QA_BOVIN) Reviewed, UniProtKB/Swiss-Prot

Last modified November 16, 2011. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Complement C1q subcomponent subunit A
Gene names
Name:C1QA
OrganismBos taurus (Bovine)
Taxonomic identifier9913 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Laurasiatheria › Cetartiodactyla › Ruminantia › Pecora › Bovidae › Bovinae › Bos

Protein attributes

Sequence length244 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

C1q associates with the proenzymes C1r and C1s to yield C1, the first component of the serum complement system. The collagen-like regions of C1q interact with the Ca2+-dependent C1r2C1s2 proenzyme complex, and efficient activation of C1 takes place on interaction of the globular heads of C1q with the Fc regions of IgG or IgM antibody present in immune complexes.

Subunit structure

C1 is a calcium-dependent trimolecular complex of C1q, R and S in the molar ration of 1:2:2. C1q subcomponent is composed of nine subunits, six of which are disulfide-linked dimers of the A and B chains, and three of which are disulfide-linked dimers of the C chain.

Subcellular location

Secreted.

Post-translational modification

O-linked glycans consist of Glc-Gal disaccharides bound to the oxygen atom of post-translationally added hydroxyl groups By similarity.

Sequence similarities

Contains 1 C1q domain.

Contains 1 collagen-like domain.

Ontologies

Keywords
   Biological processComplement pathway
Immunity
Innate immunity
   Cellular componentSecreted
   DomainCollagen
Repeat
Signal
   PTMDisulfide bond
Glycoprotein
Hydroxylation
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological processcomplement activation, classical pathway

Inferred from electronic annotation. Source: UniProtKB-KW

innate immune response

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular componentcollagen

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2222 Potential
Chain23 – 244222Complement C1q subcomponent subunit A
PRO_0000003516

Regions

Domain31 – 10979Collagen-like
Domain110 – 244135C1q

Amino acid modifications

Modified residue3914-hydroxyproline By similarity
Modified residue4514-hydroxyproline By similarity
Modified residue4815-hydroxylysine By similarity
Modified residue5414-hydroxyproline By similarity
Modified residue5714-hydroxyproline By similarity
Modified residue6715-hydroxylysine By similarity
Modified residue7314-hydroxyproline By similarity
Modified residue8514-hydroxyproline By similarity
Modified residue9714-hydroxyproline By similarity
Modified residue10015-hydroxylysine By similarity
Modified residue10315-hydroxylysine By similarity
Glycosylation481O-linked (Gal...) By similarity
Glycosylation671O-linked (Gal...) By similarity
Glycosylation1001O-linked (Gal...) By similarity
Glycosylation1031O-linked (Gal...) By similarity
Glycosylation1461N-linked (GlcNAc...) Potential
Disulfide bond26Interchain (with C-26 in B chain) By similarity

Sequences

Sequence LengthMass (Da)Tools
Q5E9E3 [UniParc].

Last modified March 15, 2005. Version 1.
Checksum: C7D5B699E501D00D

FASTA24425,802
        10         20         30         40         50         60 
MEAPRGWLVI SVLAISLASS VTEDVCRAPD GTHGSAGIPG RPGRPGLKGE RGEPGAPAIQ 

        70         80         90        100        110        120 
TGIRGLKGDQ GDPGPPGNPG RMGYPGPSGP MGPAGLPGLK GTKGSPGNIK DQPRPAFSAV 

       130        140        150        160        170        180 
GPNSVSRDNV VVFGKVITNQ ENVYQNNTGR FRCSVPGYYY FTFQVVSNWD ICLSIRSSRR 

       190        200        210        220        230        240 
DQIQPLGFCD FNSKGFFQVV SGGTVLHLQQ GDQVWIEKDP SKGRIYHGSE ADSIFSGFLI 


FPSA

« Hide

References

[1]"Characterization of 954 bovine full-CDS cDNA sequences."
Harhay G.P., Sonstegard T.S., Keele J.W., Heaton M.P., Clawson M.L., Snelling W.M., Wiedmann R.T., Van Tassell C.P., Smith T.P.L.
BMC Genomics 6:166-166(2005) [PubMed: 16305752] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
[2]"Analysis of sequences obtained from constructed full-length bovine cDNA libraries."
Yu J., Meng Y., Wang Z., Hansen C., Li C., Moore S.S.
Submitted (JAN-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Lymphoid epithelium.
[3]NIH - Mammalian Gene Collection (MGC) project
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: Crossbred X Angus.
Tissue: Ileum.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BT020977 mRNA. Translation: AAX08994.1.
AY911382 mRNA. Translation: AAW82145.1.
BC105345 mRNA. Translation: AAI05346.1.
IPIIPI00714861.
RefSeqNP_001014945.1. NM_001014945.1.
UniGeneBt.1577.

3D structure databases

ProteinModelPortalQ5E9E3.
SMRQ5E9E3. Positions 112-243.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ5E9E3.

Proteomic databases

PRIDEQ5E9E3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSBTAT00000009415; ENSBTAP00000009415; ENSBTAG00000007153.
ENSBTAT00000040146; ENSBTAP00000039925; ENSBTAG00000007153.
GeneID534961.
KEGGbta:534961.

Organism-specific databases

CTD712.

Phylogenomic databases

eggNOGmaNOG20501.
GeneTreeENSGT00590000082736.
HOVERGENHBG108220.
InParanoidQ5E9E3.
OMAGFLIFPS.
OrthoDBEOG473PS4.
PhylomeDBQ5E9E3.

Family and domain databases

InterProIPR001073. C1q.
IPR008160. Collagen.
IPR008983. Tumour_necrosis_fac-like.
[Graphical view]
Gene3DG3DSA:2.60.120.40. Tumour_necrosis_fac-like. 1 hit.
KOK03986.
PfamPF00386. C1q. 1 hit.
PF01391. Collagen. 1 hit.
[Graphical view]
PRINTSPR00007. COMPLEMNTC1Q.
SMARTSM00110. C1Q. 1 hit.
[Graphical view]
SUPFAMSSF49842. TNF_like. 1 hit.
PROSITEPS50871. C1Q. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC1QA_BOVIN
AccessionPrimary (citable) accession number: Q5E9E3
Secondary accession number(s): Q56JV0
Entry history
Integrated into UniProtKB/Swiss-Prot: April 26, 2005
Last sequence update: March 15, 2005
Last modified: November 16, 2011
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

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