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Protein
Submitted name:

RALY heterogeneous nuclear ribonucleoprotein

Gene

RALY

Organism
Bos taurus (Bovine)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
RALY heterogeneous nuclear ribonucleoproteinImported
Submitted name:
RNA binding protein (Autoantigenic, hnRNP-associated with lethal yellow) short isoformImported
Gene namesi
Name:RALYImported
OrganismiBos taurus (Bovine)Imported
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
Proteomesi
  • UP000009136 Componenti: Chromosome 13

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiQ5E952.

Expressioni

Gene expression databases

BgeeiENSBTAG00000016524.

Interactioni

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000041837.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini21 – 92RRMInterPro annotationAdd BLAST72

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili178 – 198Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0118. Eukaryota.
COG0724. LUCA.
GeneTreeiENSGT00390000006718.
HOGENOMiHOG000231958.
HOVERGENiHBG002302.
KOiK12895.
OMAiXLFDYRG.
OrthoDBiEOG091G0O1Q.
TreeFamiTF330974.

Family and domain databases

CDDicd12604. RRM_RALY. 1 hit.
InterProiView protein in InterPro
IPR017347. hnRNP_C.
IPR034502. RALY_RRM.
IPR035979. RBD_domain_sf.
IPR000504. RRM_dom.
PfamiView protein in Pfam
PF00076. RRM_1. 1 hit.
PIRSFiPIRSF037992. hnRNP-C_Raly. 1 hit.
SMARTiView protein in SMART
SM00360. RRM. 1 hit.
SUPFAMiSSF54928. SSF54928. 1 hit.
PROSITEiView protein in PROSITE
PS50102. RRM. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5E952-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLKIQTSNV TNKNDPKSIN SRVFIGNLNT AVVKKSDVET IFSKYGRVAG
60 70 80 90 100
CSVHKGYAFV QYANERHARA AVVGENGRVL AGQTLDINMA GEPKPNRPKG
110 120 130 140 150
LKRAASAIYR LFDYRGRLSP VPVPRAVPVK RPRVTVPLVR RVKTTIPVKL
160 170 180 190 200
FARSTAITTG TAKIKLKSSE LQTIKTELTQ IKSNIDALLG RLEQIAEEQK
210 220 230 240 250
ANPDGKKKGE SSSGSGSGGG SGSSGTGGSS RPPAPPEDTA SEAGTPQGEA
260 270 280
QARDDGDEEG LLTHSEEELE HSQDTDVEDG ALQ
Length:283
Mass (Da):30,143
Last modified:March 15, 2005 - v1
Checksum:i0C5142FF4B09D6EE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DAAA02036492 Genomic DNA. No translation available.
BT021068 mRNA. Translation: AAX09085.1.
RefSeqiNP_001014847.1. NM_001014847.1.
XP_005214588.1. XM_005214531.3.
XP_010809677.1. XM_010811375.2.
UniGeneiBt.42846.

Genome annotation databases

EnsembliENSBTAT00000044331; ENSBTAP00000041837; ENSBTAG00000016524.
GeneIDi504640.
KEGGibta:504640.

Similar proteinsi

Entry informationi

Entry nameiQ5E952_BOVIN
AccessioniPrimary (citable) accession number: Q5E952
Secondary accession number(s): F1MF58
Entry historyiIntegrated into UniProtKB/TrEMBL: March 15, 2005
Last sequence update: March 15, 2005
Last modified: January 31, 2018
This is version 108 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported