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Q5E7G6

- RECA_VIBF1

UniProt

Q5E7G6 - RECA_VIBF1

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Protein
Protein RecA
Gene
recA, VF_0535
Organism
Vibrio fischeri (strain ATCC 700601 / ES114)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage By similarity.UniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi65 – 728ATP By similarity

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-HAMAP
  2. DNA-dependent ATPase activity Source: UniProtKB-HAMAP
  3. damaged DNA binding Source: UniProtKB-HAMAP
  4. single-stranded DNA binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. DNA recombination Source: UniProtKB-HAMAP
  2. DNA repair Source: UniProtKB-HAMAP
  3. SOS response Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Biological processi

DNA damage, DNA recombination, DNA repair, SOS response

Keywords - Ligandi

ATP-binding, DNA-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciAFIS312309:GIWP-554-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein RecA
Alternative name(s):
Recombinase A
Gene namesi
Name:recA
Ordered Locus Names:VF_0535
OrganismiVibrio fischeri (strain ATCC 700601 / ES114)
Taxonomic identifieri312309 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio
ProteomesiUP000000537: Chromosome I

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 348348Protein RecAUniRule annotation
PRO_0000122892Add
BLAST

Proteomic databases

PRIDEiQ5E7G6.

Interactioni

Protein-protein interaction databases

STRINGi312309.VF_0535.

Structurei

3D structure databases

ProteinModelPortaliQ5E7G6.
SMRiQ5E7G6. Positions 1-328.

Family & Domainsi

Sequence similaritiesi

Belongs to the RecA family.

Phylogenomic databases

eggNOGiCOG0468.
HOGENOMiHOG000264120.
KOiK03553.
OMAiNTYGELI.
OrthoDBiEOG6ZKXNZ.

Family and domain databases

Gene3Di3.30.250.10. 1 hit.
3.40.50.300. 1 hit.
HAMAPiMF_00268. RecA.
InterProiIPR003593. AAA+_ATPase.
IPR013765. DNA_recomb/repair_RecA.
IPR020584. DNA_recomb/repair_RecA_CS.
IPR027417. P-loop_NTPase.
IPR020588. RecA_ATP-bd.
IPR023400. RecA_C.
IPR020587. RecA_monomer-monomer_interface.
[Graphical view]
PANTHERiPTHR22942:SF1. PTHR22942:SF1. 1 hit.
PfamiPF00154. RecA. 1 hit.
[Graphical view]
PRINTSiPR00142. RECA.
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
SSF54752. SSF54752. 1 hit.
TIGRFAMsiTIGR02012. tigrfam_recA. 1 hit.
PROSITEiPS00321. RECA_1. 1 hit.
PS50162. RECA_2. 1 hit.
PS50163. RECA_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5E7G6-1 [UniParc]FASTAAdd to Basket

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MDDNKKKALA AALGQIEKQF GKGSIMKLGD NRTMDVETVS TGSLSLDIAL    50
GAGGLPMGRI VEIFGPESSG KTTLTLELIA AAQREGKTCA FIDAEHALDP 100
VYAKKLGVNI DELLVSQPDT GEQALEICDA LARSGAVDVM VIDSVAALTP 150
KAEIEGEMGD SHMGLQARML SQAMRKLTGN LKQSNCMAIF INQIRMKIGV 200
MFGNPETTTG GNALKFYASV RLDIRRTGAV KDGDEVVGNE TRIKVVKNKI 250
AAPFKQAETQ IMYGQGFNRE GELIDLGVKH KLVDKAGAWY SYNGDKIGQG 300
KANASKFMRE NTEVAAELDK KLREMLLTPA EEKPETDAAP EIEENEEF 348
Length:348
Mass (Da):37,587
Last modified:March 15, 2005 - v1
Checksum:iFB374E5D3C908B64
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000020 Genomic DNA. Translation: AAW85030.1.
RefSeqiYP_203918.1. NC_006840.2.

Genome annotation databases

EnsemblBacteriaiAAW85030; AAW85030; VF_0535.
GeneIDi3277128.
KEGGivfi:VF_0535.
PATRICi20111584. VBIVibFis127983_0527.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000020 Genomic DNA. Translation: AAW85030.1 .
RefSeqi YP_203918.1. NC_006840.2.

3D structure databases

ProteinModelPortali Q5E7G6.
SMRi Q5E7G6. Positions 1-328.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 312309.VF_0535.

Proteomic databases

PRIDEi Q5E7G6.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAW85030 ; AAW85030 ; VF_0535 .
GeneIDi 3277128.
KEGGi vfi:VF_0535.
PATRICi 20111584. VBIVibFis127983_0527.

Phylogenomic databases

eggNOGi COG0468.
HOGENOMi HOG000264120.
KOi K03553.
OMAi NTYGELI.
OrthoDBi EOG6ZKXNZ.

Enzyme and pathway databases

BioCyci AFIS312309:GIWP-554-MONOMER.

Family and domain databases

Gene3Di 3.30.250.10. 1 hit.
3.40.50.300. 1 hit.
HAMAPi MF_00268. RecA.
InterProi IPR003593. AAA+_ATPase.
IPR013765. DNA_recomb/repair_RecA.
IPR020584. DNA_recomb/repair_RecA_CS.
IPR027417. P-loop_NTPase.
IPR020588. RecA_ATP-bd.
IPR023400. RecA_C.
IPR020587. RecA_monomer-monomer_interface.
[Graphical view ]
PANTHERi PTHR22942:SF1. PTHR22942:SF1. 1 hit.
Pfami PF00154. RecA. 1 hit.
[Graphical view ]
PRINTSi PR00142. RECA.
SMARTi SM00382. AAA. 1 hit.
[Graphical view ]
SUPFAMi SSF52540. SSF52540. 1 hit.
SSF54752. SSF54752. 1 hit.
TIGRFAMsi TIGR02012. tigrfam_recA. 1 hit.
PROSITEi PS00321. RECA_1. 1 hit.
PS50162. RECA_2. 1 hit.
PS50163. RECA_3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700601 / ES114.

Entry informationi

Entry nameiRECA_VIBF1
AccessioniPrimary (citable) accession number: Q5E7G6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 27, 2005
Last sequence update: March 15, 2005
Last modified: May 14, 2014
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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