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Q5E7G6

- RECA_VIBF1

UniProt

Q5E7G6 - RECA_VIBF1

Protein

Protein RecA

Gene

recA

Organism
Vibrio fischeri (strain ATCC 700601 / ES114)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 69 (01 Oct 2014)
      Sequence version 1 (15 Mar 2005)
      Previous versions | rss
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    Functioni

    Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage.UniRule annotation

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi65 – 728ATPUniRule annotation

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-HAMAP
    2. damaged DNA binding Source: UniProtKB-HAMAP
    3. DNA-dependent ATPase activity Source: UniProtKB-HAMAP
    4. single-stranded DNA binding Source: UniProtKB-HAMAP

    GO - Biological processi

    1. DNA recombination Source: UniProtKB-HAMAP
    2. DNA repair Source: UniProtKB-HAMAP
    3. SOS response Source: UniProtKB-HAMAP

    Keywords - Biological processi

    DNA damage, DNA recombination, DNA repair, SOS response

    Keywords - Ligandi

    ATP-binding, DNA-binding, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciAFIS312309:GIWP-554-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Protein RecAUniRule annotation
    Alternative name(s):
    Recombinase AUniRule annotation
    Gene namesi
    Name:recAUniRule annotation
    Ordered Locus Names:VF_0535
    OrganismiVibrio fischeri (strain ATCC 700601 / ES114)
    Taxonomic identifieri312309 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio
    ProteomesiUP000000537: Chromosome I

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 348348Protein RecAPRO_0000122892Add
    BLAST

    Proteomic databases

    PRIDEiQ5E7G6.

    Interactioni

    Protein-protein interaction databases

    STRINGi312309.VF_0535.

    Structurei

    3D structure databases

    ProteinModelPortaliQ5E7G6.
    SMRiQ5E7G6. Positions 1-328.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the RecA family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0468.
    HOGENOMiHOG000264120.
    KOiK03553.
    OMAiNTYGELI.
    OrthoDBiEOG6ZKXNZ.

    Family and domain databases

    Gene3Di3.30.250.10. 1 hit.
    3.40.50.300. 1 hit.
    HAMAPiMF_00268. RecA.
    InterProiIPR003593. AAA+_ATPase.
    IPR013765. DNA_recomb/repair_RecA.
    IPR020584. DNA_recomb/repair_RecA_CS.
    IPR027417. P-loop_NTPase.
    IPR020588. RecA_ATP-bd.
    IPR023400. RecA_C.
    IPR020587. RecA_monomer-monomer_interface.
    [Graphical view]
    PANTHERiPTHR22942:SF1. PTHR22942:SF1. 1 hit.
    PfamiPF00154. RecA. 1 hit.
    [Graphical view]
    PRINTSiPR00142. RECA.
    SMARTiSM00382. AAA. 1 hit.
    [Graphical view]
    SUPFAMiSSF52540. SSF52540. 1 hit.
    SSF54752. SSF54752. 1 hit.
    TIGRFAMsiTIGR02012. tigrfam_recA. 1 hit.
    PROSITEiPS00321. RECA_1. 1 hit.
    PS50162. RECA_2. 1 hit.
    PS50163. RECA_3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q5E7G6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDDNKKKALA AALGQIEKQF GKGSIMKLGD NRTMDVETVS TGSLSLDIAL    50
    GAGGLPMGRI VEIFGPESSG KTTLTLELIA AAQREGKTCA FIDAEHALDP 100
    VYAKKLGVNI DELLVSQPDT GEQALEICDA LARSGAVDVM VIDSVAALTP 150
    KAEIEGEMGD SHMGLQARML SQAMRKLTGN LKQSNCMAIF INQIRMKIGV 200
    MFGNPETTTG GNALKFYASV RLDIRRTGAV KDGDEVVGNE TRIKVVKNKI 250
    AAPFKQAETQ IMYGQGFNRE GELIDLGVKH KLVDKAGAWY SYNGDKIGQG 300
    KANASKFMRE NTEVAAELDK KLREMLLTPA EEKPETDAAP EIEENEEF 348
    Length:348
    Mass (Da):37,587
    Last modified:March 15, 2005 - v1
    Checksum:iFB374E5D3C908B64
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000020 Genomic DNA. Translation: AAW85030.1.
    RefSeqiYP_203918.1. NC_006840.2.

    Genome annotation databases

    EnsemblBacteriaiAAW85030; AAW85030; VF_0535.
    GeneIDi3277128.
    KEGGivfi:VF_0535.
    PATRICi20111584. VBIVibFis127983_0527.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000020 Genomic DNA. Translation: AAW85030.1 .
    RefSeqi YP_203918.1. NC_006840.2.

    3D structure databases

    ProteinModelPortali Q5E7G6.
    SMRi Q5E7G6. Positions 1-328.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 312309.VF_0535.

    Proteomic databases

    PRIDEi Q5E7G6.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAW85030 ; AAW85030 ; VF_0535 .
    GeneIDi 3277128.
    KEGGi vfi:VF_0535.
    PATRICi 20111584. VBIVibFis127983_0527.

    Phylogenomic databases

    eggNOGi COG0468.
    HOGENOMi HOG000264120.
    KOi K03553.
    OMAi NTYGELI.
    OrthoDBi EOG6ZKXNZ.

    Enzyme and pathway databases

    BioCyci AFIS312309:GIWP-554-MONOMER.

    Family and domain databases

    Gene3Di 3.30.250.10. 1 hit.
    3.40.50.300. 1 hit.
    HAMAPi MF_00268. RecA.
    InterProi IPR003593. AAA+_ATPase.
    IPR013765. DNA_recomb/repair_RecA.
    IPR020584. DNA_recomb/repair_RecA_CS.
    IPR027417. P-loop_NTPase.
    IPR020588. RecA_ATP-bd.
    IPR023400. RecA_C.
    IPR020587. RecA_monomer-monomer_interface.
    [Graphical view ]
    PANTHERi PTHR22942:SF1. PTHR22942:SF1. 1 hit.
    Pfami PF00154. RecA. 1 hit.
    [Graphical view ]
    PRINTSi PR00142. RECA.
    SMARTi SM00382. AAA. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52540. SSF52540. 1 hit.
    SSF54752. SSF54752. 1 hit.
    TIGRFAMsi TIGR02012. tigrfam_recA. 1 hit.
    PROSITEi PS00321. RECA_1. 1 hit.
    PS50162. RECA_2. 1 hit.
    PS50163. RECA_3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 700601 / ES114.

    Entry informationi

    Entry nameiRECA_VIBF1
    AccessioniPrimary (citable) accession number: Q5E7G6
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: September 27, 2005
    Last sequence update: March 15, 2005
    Last modified: October 1, 2014
    This is version 69 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3