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Q5E7G6 (RECA_VIBF1) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 67. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Protein RecA
Alternative name(s):
Recombinase A
Gene names
Name:recA
Ordered Locus Names:VF_0535
OrganismVibrio fischeri (strain ATCC 700601 / ES114) [Reference proteome] [HAMAP]
Taxonomic identifier312309 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio

Protein attributes

Sequence length348 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage By similarity. HAMAP-Rule MF_00268

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00268.

Sequence similarities

Belongs to the RecA family.

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 348348Protein RecA HAMAP-Rule MF_00268
PRO_0000122892

Regions

Nucleotide binding65 – 728ATP By similarity

Sequences

Sequence LengthMass (Da)Tools
Q5E7G6 [UniParc].

Last modified March 15, 2005. Version 1.
Checksum: FB374E5D3C908B64

FASTA34837,587
        10         20         30         40         50         60 
MDDNKKKALA AALGQIEKQF GKGSIMKLGD NRTMDVETVS TGSLSLDIAL GAGGLPMGRI 

        70         80         90        100        110        120 
VEIFGPESSG KTTLTLELIA AAQREGKTCA FIDAEHALDP VYAKKLGVNI DELLVSQPDT 

       130        140        150        160        170        180 
GEQALEICDA LARSGAVDVM VIDSVAALTP KAEIEGEMGD SHMGLQARML SQAMRKLTGN 

       190        200        210        220        230        240 
LKQSNCMAIF INQIRMKIGV MFGNPETTTG GNALKFYASV RLDIRRTGAV KDGDEVVGNE 

       250        260        270        280        290        300 
TRIKVVKNKI AAPFKQAETQ IMYGQGFNRE GELIDLGVKH KLVDKAGAWY SYNGDKIGQG 

       310        320        330        340 
KANASKFMRE NTEVAAELDK KLREMLLTPA EEKPETDAAP EIEENEEF 

« Hide

References

[1]"Complete genome sequence of Vibrio fischeri: a symbiotic bacterium with pathogenic congeners."
Ruby E.G., Urbanowski M., Campbell J., Dunn A., Faini M., Gunsalus R., Lostroh P., Lupp C., McCann J., Millikan D., Schaefer A., Stabb E., Stevens A., Visick K., Whistler C., Greenberg E.P.
Proc. Natl. Acad. Sci. U.S.A. 102:3004-3009(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700601 / ES114.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000020 Genomic DNA. Translation: AAW85030.1.
RefSeqYP_203918.1. NC_006840.2.

3D structure databases

ProteinModelPortalQ5E7G6.
SMRQ5E7G6. Positions 1-328.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING312309.VF_0535.

Proteomic databases

PRIDEQ5E7G6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAW85030; AAW85030; VF_0535.
GeneID3277128.
KEGGvfi:VF_0535.
PATRIC20111584. VBIVibFis127983_0527.

Phylogenomic databases

eggNOGCOG0468.
HOGENOMHOG000264120.
KOK03553.
OMADYGEQAL.
OrthoDBEOG6ZKXNZ.
ProtClustDBPRK09354.

Enzyme and pathway databases

BioCycAFIS312309:GIWP-554-MONOMER.

Family and domain databases

Gene3D3.30.250.10. 1 hit.
3.40.50.300. 1 hit.
HAMAPMF_00268. RecA.
InterProIPR003593. AAA+_ATPase.
IPR013765. DNA_recomb/repair_RecA.
IPR020584. DNA_recomb/repair_RecA_CS.
IPR027417. P-loop_NTPase.
IPR020588. RecA_ATP-bd.
IPR023400. RecA_C.
IPR020587. RecA_monomer-monomer_interface.
[Graphical view]
PANTHERPTHR22942:SF1. PTHR22942:SF1. 1 hit.
PfamPF00154. RecA. 1 hit.
[Graphical view]
PRINTSPR00142. RECA.
SMARTSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMSSF52540. SSF52540. 1 hit.
SSF54752. SSF54752. 1 hit.
TIGRFAMsTIGR02012. tigrfam_recA. 1 hit.
PROSITEPS00321. RECA_1. 1 hit.
PS50162. RECA_2. 1 hit.
PS50163. RECA_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRECA_VIBF1
AccessionPrimary (citable) accession number: Q5E7G6
Entry history
Integrated into UniProtKB/Swiss-Prot: September 27, 2005
Last sequence update: March 15, 2005
Last modified: April 16, 2014
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families