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Q5E796 (Q5E796_VIBF1) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.2.1.86 EMBL AAW85100.1
Gene names
Name:bglA EMBL AAW85100.1
Ordered Locus Names:VF_0605
OrganismVibrio fischeri (strain ATCC 700601 / ES114) EMBL AAW85100.1
Taxonomic identifier312309 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio

Protein attributes

Sequence length469 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q5E796 [UniParc].

Last modified March 15, 2005. Version 1.
Checksum: EF0D094C44DD91D4

FASTA46953,657
        10         20         30         40         50         60 
MKFAHDFLFG AATASYQVEG AWDQDGKGPT NWDEFTKIPG KTFEGTNGDV AVDHYNRYKE 

        70         80         90        100        110        120 
DIALMAEMGL ESYRFSISWA RIFPNGTGEI NQKGIDFYNN LIDECLKYGI VPFVTLYHWD 

       130        140        150        160        170        180 
LPLALEKEGA WLNKATGDAY VEFAKLCFNE FGDRVKHFIT FNETVVFCAL GYMAGAHPPG 

       190        200        210        220        230        240 
IQNDPKKYFQ ATHNVFYAHA KAVIEYKKLN QFGEIGLSHV FSPAFGVDDS EESHFAAMHA 

       250        260        270        280        290        300 
NQFSMNWFYD PILLGKYPEY VVKQLQEEGN LPDWTDEELQ TIFEAAPLND FMGLNYYQPQ 

       310        320        330        340        350        360 
RVEKIQGDVE ARTITRENST GSPGNPSYDN VYRTVKMADK KYTKWDWEIS PEGFVGGLEM 

       370        380        390        400        410        420 
LKEHYGQIKL YITENGLGDE DPIIEGEVCD IPRINFIKEH LGAVKEAVRR GVHIKGYYAW 

       430        440        450        460 
SAIDLLSWLN GYKKQYGFIY VDHQNGLARK KKASFHWFKD VIATRGEDI 

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References

[1]"Complete genome sequence of Vibrio fischeri: a symbiotic bacterium with pathogenic congeners."
Ruby E.G., Urbanowski M., Campbell J., Dunn A., Faini M., Gunsalus R., Lostroh P., Lupp C., McCann J., Millikan D., Schaefer A., Stabb E., Stevens A., Visick K., Whistler C., Greenberg E.P.
Proc. Natl. Acad. Sci. U.S.A. 102:3004-3009(2005) [PubMed: 15703294] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700601 / ES114.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000020 Genomic DNA. Translation: AAW85100.1.
RefSeqYP_203988.1. NC_006840.2.

3D structure databases

ProteinModelPortalQ5E796.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ5E796.

Protein family/group databases

CAZyGH1. Glycoside Hydrolase Family 1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3278047.
GenomeReviewsGene locus VF_0605 in contig CP000020_GR.
KEGGvfi:VF_0605.
NMPDRfig|312309.3.peg.701.
PATRIC20111752. VBIVibFis127983_0597.

Phylogenomic databases

eggNOGCOG2723.
HOGENOMHBG316462.
OMAANETTEW.
PhylomeDBQ5E796.
ProtClustDBCLSK882403.

Enzyme and pathway databases

BioCycVFIS312309:VF0605-MONOMER.

Family and domain databases

InterProIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PANTHERPTHR10353. Glyco_hydro_1. 1 hit.
PfamPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSPR00131. GLHYDRLASE1.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
PROSITEPS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5E796_VIBF1
AccessionPrimary (citable) accession number: Q5E796
Entry history
Integrated into UniProtKB/TrEMBL: March 15, 2005
Last sequence update: March 15, 2005
Last modified: January 25, 2012
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)