Q5E746 (Q5E746_VIBF1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Endochitinase EMBL AAW85150.1
EC=3.2.1.14 EMBL AAW85150.1

Gene names

Name:	chiA EMBL AAW85150.1
Ordered Locus Names:	VF_0655 EMBL AAW85150.1

Organism

Vibrio fischeri (strain ATCC 700601 / ES114) [Reference proteome] [HAMAP] EMBL AAW85150.1

Taxonomic identifier

312309 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Aliivibrio › Vibrio fischeri

Protein attributes

Sequence length	846 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 18 family. RuleBase RU004453

Ontologies

Keywords
Molecular function	Glycosidase RuleBase RU000489 EMBL AAW85150.1 Hydrolase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Cellular_component	extracellular region Inferred from electronic annotation. Source: InterPro
Molecular_function	carbohydrate binding Inferred from electronic annotation. Source: InterPro chitinase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5E746 [UniParc]. Last modified March 15, 2005. Version 1. Checksum: 4AE0987EE33368A1	FASTA	846	89,591
	10 20 30 40 50 60 MKGIFIKSAI ASALFISYGA NAFDCSSTPI WQSTQAYSGG DTVQQNNIAY QAQWWSQGND 70 80 90 100 110 120 PETHSGEWQE WKNLGKCSTG GENIAPTVTI ISPINNAIIP EASLITLQAS ADDKDGSITQ 130 140 150 160 170 180 VEFLSNNQSI AIVTSPPYNT PWIAIKNTTS IIVIATDDEG ATTTESVSIK VQSAGELVPP 190 200 210 220 230 240 TIELTSPIGN EKLTTGDTLV VSANANDSDG VINNVEFYID NQLAFTDTEA PFEYSWLATS 250 260 270 280 290 300 GPHQFKAKAT DNDNQTTISK GVTLEVSEPS SGGCAGLPQY KSGTNYAAGD EVQNLNQKYR 310 320 330 340 350 360 CDIGGWCSSS SDWAYAPGTG SNWQDAWTGL GVCSTPPQVT ITSPNDNSVI LAGSIVEVNA 370 380 390 400 410 420 SASDSDGSVI GVEFFANNVT LGSDTQAPYT VNWDATVIGS NTLKAVATDN EGNNSENSIL 430 440 450 460 470 480 VTVSDQNVVT ALTSPITGSS LVLGKITQLK ATATSLSSSI TKVDFLVNGV IIASDTTSPY 490 500 510 520 530 540 SVNWTPAAIG AYTLSVEATD AQGNTALSTA SSVSVVEQTL AKHKLIGYWH NFVNGSGCPI 550 560 570 580 590 600 RLADMSDEWD IIDIAFADND RNSNGTVHFN LYSGDIHSSC PALDPTQFKQ DMAALQAKGK 610 620 630 640 650 660 VFVLSLGGAE GTITLNTDND EVNFVNSLTA IIDEWGFDGL DIDLESGSNL LHGTQIQARL 670 680 690 700 710 720 PTALKQIEAN MGGDMYLTMA PEHPYVQGGM IAYSGIWGAY IPVINQVRDT LDLLHVQLYN 730 740 750 760 770 780 NGGLPNPYMP GSAPEGSVDM MVASVKMLVE GFELADGTFF APLRDDQVAI GLPSGPSSAN 790 800 810 820 830 840 SGQAPIQNIV DALDCVTYGT ACSSVVPSKL YSNFGGVMTW SINWDLHDGF NFSKPVGDKL NQMNNQ

References

[1]

"Complete genome sequence of Vibrio fischeri: a symbiotic bacterium with pathogenic congeners." Ruby E.G., Urbanowski M., Campbell J., Dunn A., Faini M., Gunsalus R., Lostroh P., Lupp C., McCann J., Millikan D., Schaefer A., Stabb E., Stevens A., Visick K., Whistler C., Greenberg E.P. Proc. Natl. Acad. Sci. U.S.A. 102:3004-3009(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700601 / ES114.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000020 Genomic DNA. Translation: AAW85150.1.
RefSeq	YP_204038.1. NC_006840.2.
3D structure databases
ProteinModelPortal	Q5E746.
ModBase	Search...
Protein-protein interaction databases
STRING	312309.VF_0655.
Protein family/group databases
CAZy	CBM5. Carbohydrate-Binding Module Family 5. GH18. Glycoside Hydrolase Family 18.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAW85150; AAW85150; VF_0655.
GeneID	3277358.
KEGG	vfi:VF_0655.
PATRIC	20111854. VBIVibFis127983_0648.
Phylogenomic databases
eggNOG	COG3979.
HOGENOM	HOG000095635.
KO	K01183.
OMA	VTQVEFF.
ProtClustDB	CLSK874611.
Enzyme and pathway databases
BioCyc	AFIS312309:GIWP-690-MONOMER.
Family and domain databases
Gene3D	2.10.10.20. 1 hit. 3.20.20.80. 1 hit.
InterPro	IPR003610. CBM_fam5/12. IPR001223. Glyco_hydro18cat. IPR001579. Glyco_hydro_18_chit_AS. IPR013781. Glyco_hydro_catalytic_dom. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Pfam	PF02839. CBM_5_12. 2 hits. PF00704. Glyco_hydro_18. 1 hit. [Graphical view]
SMART	SM00495. ChtBD3. 2 hits. [Graphical view]
SUPFAM	SSF51055. CBM_5_12. 1 hit. SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS01095. CHITINASE_18. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q5E746_VIBF1

Accession

Primary (citable) accession number: Q5E746

Entry history

Integrated into UniProtKB/TrEMBL:	March 15, 2005
Last sequence update:	March 15, 2005
Last modified:	May 1, 2013
This is version 57 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)