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Q5E6F9

- Q5E6F9_VIBF1

UniProt

Q5E6F9 - Q5E6F9_VIBF1

Protein
Submitted name:

Glutamate decarboxylase

Gene

VF_0892

Organism
Vibrio fischeri (strain ATCC 700601 / ES114)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 62 (01 Oct 2014)
      Sequence version 1 (15 Mar 2005)
      Previous versions | rss
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    Functioni

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: UniProtKB-EC
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. carboxylic acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotationImported

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciAFIS312309:GIWP-941-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Glutamate decarboxylaseImported (EC:4.1.1.15Imported)
    Gene namesi
    Ordered Locus Names:VF_0892Imported
    OrganismiVibrio fischeri (strain ATCC 700601 / ES114)Imported
    Taxonomic identifieri312309 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio
    ProteomesiUP000000537: Chromosome I

    Interactioni

    Protein-protein interaction databases

    STRINGi312309.VF_0892.

    Structurei

    3D structure databases

    ProteinModelPortaliQ5E6F9.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0076.
    HOGENOMiHOG000282553.
    KOiK01580.
    OMAiARYFRQP.
    OrthoDBiEOG6MSRZP.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q5E6F9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVTDNKTADA SFESLLRIFT VPEAPDSTLG IIEKELSQNL NQFLREHIVA    50
    EEKPLTEIEK DFTDSSMPES PTYVSEHTEH LLDTLVSQSV HTSAPSFIGH 100
    MTSALPYFLM PLSKIMIALN QNLVKIETSK AFTPLERQVL GMLHRLIFGQ 150
    KDSFYQHWMH SADHSLGAFC SGGTIANITA LWVARNRLLK PEGDFEGIAK 200
    QGLFAALMHY KCNGLAIFVS ERGHYSLKKA ADVLGIGQDG VIAVKTDNNN 250
    RVCLDDLELK IAQAKAKNIK PLAIVGVAGT TETGSIDPLR ELANVAQREG 300
    CHFHVDAAWG GATLMSNTYR HLLDGIDLAD SVTIDAHKQL YVPMGAGMVI 350
    FKDPELMSSI QHHAEYILRK GSKDLGRHTL EGSRSGMAML LYSCFNVISR 400
    PGYELLINQS IEKAHYFADL IQQQDDFELI TEPELCLLTY RYVPSNVKAA 450
    LAIATDEQKI EIYEHLDNLT KYIQKTQRET GKSFVSRTRL TPEAYQHQPT 500
    IVFRVVLANP LTTKEILQNV LIEQREIASS SEISLPLLNQ IVGNILH 547
    Length:547
    Mass (Da):60,953
    Last modified:March 15, 2005 - v1
    Checksum:iB089F65FD9D6844C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000020 Genomic DNA. Translation: AAW85387.1.
    RefSeqiWP_011261555.1. NC_006840.2.
    YP_204275.1. NC_006840.2.

    Genome annotation databases

    EnsemblBacteriaiAAW85387; AAW85387; VF_0892.
    GeneIDi3277990.
    KEGGivfi:VF_0892.
    PATRICi20112364. VBIVibFis127983_0888.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000020 Genomic DNA. Translation: AAW85387.1 .
    RefSeqi WP_011261555.1. NC_006840.2.
    YP_204275.1. NC_006840.2.

    3D structure databases

    ProteinModelPortali Q5E6F9.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 312309.VF_0892.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAW85387 ; AAW85387 ; VF_0892 .
    GeneIDi 3277990.
    KEGGi vfi:VF_0892.
    PATRICi 20112364. VBIVibFis127983_0888.

    Phylogenomic databases

    eggNOGi COG0076.
    HOGENOMi HOG000282553.
    KOi K01580.
    OMAi ARYFRQP.
    OrthoDBi EOG6MSRZP.

    Enzyme and pathway databases

    BioCyci AFIS312309:GIWP-941-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 700601 / ES114Imported.

    Entry informationi

    Entry nameiQ5E6F9_VIBF1
    AccessioniPrimary (citable) accession number: Q5E6F9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 15, 2005
    Last sequence update: March 15, 2005
    Last modified: October 1, 2014
    This is version 62 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3