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Q5E6F9

- Q5E6F9_VIBF1

UniProt

Q5E6F9 - Q5E6F9_VIBF1

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Protein
Submitted name:

Glutamate decarboxylase

Gene

VF_0892

Organism
Vibrio fischeri (strain ATCC 700601 / ES114)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

Cofactori

Pyridoxal phosphate.UniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. carboxylic acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationImported

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciAFIS312309:GIWP-941-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Glutamate decarboxylaseImported (EC:4.1.1.15Imported)
Gene namesi
Ordered Locus Names:VF_0892Imported
OrganismiVibrio fischeri (strain ATCC 700601 / ES114)Imported
Taxonomic identifieri312309 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio
ProteomesiUP000000537: Chromosome I

Interactioni

Protein-protein interaction databases

STRINGi312309.VF_0892.

Structurei

3D structure databases

ProteinModelPortaliQ5E6F9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000282553.
KOiK01580.
OMAiARYFRQP.
OrthoDBiEOG6MSRZP.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5E6F9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVTDNKTADA SFESLLRIFT VPEAPDSTLG IIEKELSQNL NQFLREHIVA
60 70 80 90 100
EEKPLTEIEK DFTDSSMPES PTYVSEHTEH LLDTLVSQSV HTSAPSFIGH
110 120 130 140 150
MTSALPYFLM PLSKIMIALN QNLVKIETSK AFTPLERQVL GMLHRLIFGQ
160 170 180 190 200
KDSFYQHWMH SADHSLGAFC SGGTIANITA LWVARNRLLK PEGDFEGIAK
210 220 230 240 250
QGLFAALMHY KCNGLAIFVS ERGHYSLKKA ADVLGIGQDG VIAVKTDNNN
260 270 280 290 300
RVCLDDLELK IAQAKAKNIK PLAIVGVAGT TETGSIDPLR ELANVAQREG
310 320 330 340 350
CHFHVDAAWG GATLMSNTYR HLLDGIDLAD SVTIDAHKQL YVPMGAGMVI
360 370 380 390 400
FKDPELMSSI QHHAEYILRK GSKDLGRHTL EGSRSGMAML LYSCFNVISR
410 420 430 440 450
PGYELLINQS IEKAHYFADL IQQQDDFELI TEPELCLLTY RYVPSNVKAA
460 470 480 490 500
LAIATDEQKI EIYEHLDNLT KYIQKTQRET GKSFVSRTRL TPEAYQHQPT
510 520 530 540
IVFRVVLANP LTTKEILQNV LIEQREIASS SEISLPLLNQ IVGNILH
Length:547
Mass (Da):60,953
Last modified:March 15, 2005 - v1
Checksum:iB089F65FD9D6844C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000020 Genomic DNA. Translation: AAW85387.1.
RefSeqiWP_011261555.1. NC_006840.2.
YP_204275.1. NC_006840.2.

Genome annotation databases

EnsemblBacteriaiAAW85387; AAW85387; VF_0892.
GeneIDi3277990.
KEGGivfi:VF_0892.
PATRICi20112364. VBIVibFis127983_0888.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000020 Genomic DNA. Translation: AAW85387.1 .
RefSeqi WP_011261555.1. NC_006840.2.
YP_204275.1. NC_006840.2.

3D structure databases

ProteinModelPortali Q5E6F9.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 312309.VF_0892.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAW85387 ; AAW85387 ; VF_0892 .
GeneIDi 3277990.
KEGGi vfi:VF_0892.
PATRICi 20112364. VBIVibFis127983_0888.

Phylogenomic databases

eggNOGi COG0076.
HOGENOMi HOG000282553.
KOi K01580.
OMAi ARYFRQP.
OrthoDBi EOG6MSRZP.

Enzyme and pathway databases

BioCyci AFIS312309:GIWP-941-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700601 / ES114Imported.

Entry informationi

Entry nameiQ5E6F9_VIBF1
AccessioniPrimary (citable) accession number: Q5E6F9
Entry historyi
Integrated into UniProtKB/TrEMBL: March 15, 2005
Last sequence update: March 15, 2005
Last modified: October 1, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3