Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q5E6D9 (Q5E6D9_VIBF1) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:yeaD EMBL AAW85407.1
Ordered Locus Names:VF_0912 EMBL AAW85407.1
OrganismVibrio fischeri (strain ATCC 700601 / ES114) [Reference proteome] [HAMAP] EMBL AAW85407.1
Taxonomic identifier312309 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio

Protein attributes

Sequence length291 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q5E6D9 [UniParc].

Last modified March 15, 2005. Version 1.
Checksum: 8A3F8C2146542BED

FASTA29131,715
        10         20         30         40         50         60 
MNLTQLPIIS VLSDNVTVAQ LDDVKVIRVI HDKANAAISL HGGHVLSFTP KGQDDLIWMS 

        70         80         90        100        110        120 
KEAIFNPEKA IRGGVPVCWP WFGRIADPAH GFARNNEWTL IEHRENDNGV IIVLGLEASE 

       130        140        150        160        170        180 
ATKAIWPFEF EARLTVEIGD ELRITLDAKN TDSKAWNCSG ALHTYLNVAD IASTTITGMG 

       190        200        210        220        230        240 
PTYIDGLQNA KLCTGEDTLS ISAAVDRVYT QPENTVSVSD SQRTLTVTNS GHNAAVIWNP 

       250        260        270        280        290 
WIEGAESMAD MNNDGYKTMV CVESTYHATS LEEAQTVEPG NAFTLTTTIK A 

« Hide

References

[1]"Complete genome sequence of Vibrio fischeri: a symbiotic bacterium with pathogenic congeners."
Ruby E.G., Urbanowski M., Campbell J., Dunn A., Faini M., Gunsalus R., Lostroh P., Lupp C., McCann J., Millikan D., Schaefer A., Stabb E., Stevens A., Visick K., Whistler C., Greenberg E.P.
Proc. Natl. Acad. Sci. U.S.A. 102:3004-3009(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700601 / ES114.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000020 Genomic DNA. Translation: AAW85407.1.
RefSeqYP_204295.1. NC_006840.2.

3D structure databases

ProteinModelPortalQ5E6D9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING312309.VF_0912.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAW85407; AAW85407; VF_0912.
GeneID3278154.
KEGGvfi:VF_0912.
PATRIC20112404. VBIVibFis127983_0908.

Phylogenomic databases

eggNOGCOG0676.
HOGENOMHOG000283048.
KOK01792.
OMAQRMLCIE.
OrthoDBEOG6M0T7Z.
ProtClustDBCLSK874633.

Enzyme and pathway databases

BioCycAFIS312309:GIWP-961-MONOMER.

Family and domain databases

Gene3D2.70.98.10. 1 hit.
InterProIPR008183. Aldose_1/G6P_1-epimerase.
IPR025532. G6P_1-epimerase.
IPR011013. Gal_mutarotase_SF_dom.
IPR014718. Glyco_hydro-type_carb-bd_sub.
[Graphical view]
PfamPF01263. Aldose_epim. 1 hit.
[Graphical view]
PIRSFPIRSF016020. PHexose_mutarotase. 1 hit.
SUPFAMSSF74650. SSF74650. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ5E6D9_VIBF1
AccessionPrimary (citable) accession number: Q5E6D9
Entry history
Integrated into UniProtKB/TrEMBL: March 15, 2005
Last sequence update: March 15, 2005
Last modified: November 13, 2013
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)