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Q5E6D0

- Q5E6D0_VIBF1

UniProt

Q5E6D0 - Q5E6D0_VIBF1

Protein

Superoxide dismutase

Gene

sodB

Organism
Vibrio fischeri (strain ATCC 700601 / ES114)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 60 (01 Oct 2014)
      Sequence version 1 (15 Mar 2005)
      Previous versions | rss
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    Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation
    Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: InterPro
    2. superoxide dismutase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotationImported

    Enzyme and pathway databases

    BioCyciAFIS312309:GIWP-971-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Name:sodBImported
    Ordered Locus Names:VF_0921Imported
    OrganismiVibrio fischeri (strain ATCC 700601 / ES114)Imported
    Taxonomic identifieri312309 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio
    ProteomesiUP000000537: Chromosome I

    Interactioni

    Protein-protein interaction databases

    STRINGi312309.VF_0921.

    Structurei

    3D structure databases

    ProteinModelPortaliQ5E6D0.
    SMRiQ5E6D0. Positions 2-193.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0605.
    HOGENOMiHOG000013584.
    KOiK04564.
    OMAiWTWLVKG.
    OrthoDBiEOG63NMNT.

    Family and domain databases

    InterProiIPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view]
    PANTHERiPTHR11404. PTHR11404. 1 hit.
    PfamiPF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000349. SODismutase. 1 hit.
    PRINTSiPR01703. MNSODISMTASE.
    SUPFAMiSSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEiPS00088. SOD_MN. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q5E6D0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSFELPALPY AKDALEPHIS AETLDFHHGK HHNTYVVKLN GLIPGTEFEG    50
    KTLEEIIKTS TGGVFNNAAQ IWNHTFYWHC LAPNAGGEPT GAVAEAINAA 100
    FGSFEEFKAQ FTDSAINNFG SSWTWLVKKA DGSLEIVNTS NAATPLTEEG 150
    TTPLLTVDLW EHAYYIDFRN VRPDYMGAFW NLVNWSFVEE NLAK 194
    Length:194
    Mass (Da):21,585
    Last modified:March 15, 2005 - v1
    Checksum:i2324CFA92D72E1C7
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000020 Genomic DNA. Translation: AAW85416.1.
    RefSeqiYP_204304.1. NC_006840.2.

    Genome annotation databases

    EnsemblBacteriaiAAW85416; AAW85416; VF_0921.
    GeneIDi3278258.
    KEGGivfi:VF_0921.
    PATRICi20112426. VBIVibFis127983_0919.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000020 Genomic DNA. Translation: AAW85416.1 .
    RefSeqi YP_204304.1. NC_006840.2.

    3D structure databases

    ProteinModelPortali Q5E6D0.
    SMRi Q5E6D0. Positions 2-193.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 312309.VF_0921.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAW85416 ; AAW85416 ; VF_0921 .
    GeneIDi 3278258.
    KEGGi vfi:VF_0921.
    PATRICi 20112426. VBIVibFis127983_0919.

    Phylogenomic databases

    eggNOGi COG0605.
    HOGENOMi HOG000013584.
    KOi K04564.
    OMAi WTWLVKG.
    OrthoDBi EOG63NMNT.

    Enzyme and pathway databases

    BioCyci AFIS312309:GIWP-971-MONOMER.

    Family and domain databases

    InterProi IPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view ]
    PANTHERi PTHR11404. PTHR11404. 1 hit.
    Pfami PF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000349. SODismutase. 1 hit.
    PRINTSi PR01703. MNSODISMTASE.
    SUPFAMi SSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEi PS00088. SOD_MN. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 700601 / ES114Imported.

    Entry informationi

    Entry nameiQ5E6D0_VIBF1
    AccessioniPrimary (citable) accession number: Q5E6D0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 15, 2005
    Last sequence update: March 15, 2005
    Last modified: October 1, 2014
    This is version 60 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3