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Q5E5Y7

- Q5E5Y7_VIBF1

UniProt

Q5E5Y7 - Q5E5Y7_VIBF1

Protein

Glutamate decarboxylase

Gene

gadA

Organism
Vibrio fischeri (strain ATCC 700601 / ES114)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 60 (01 Oct 2014)
      Sequence version 1 (15 Mar 2005)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: UniProtKB-EC
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. glutamate metabolic process Source: InterPro

    Keywords - Molecular functioni

    DecarboxylaseUniRule annotation, Lyase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciAFIS312309:GIWP-1122-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
    Gene namesi
    Name:gadAImported
    Ordered Locus Names:VF_1064Imported
    OrganismiVibrio fischeri (strain ATCC 700601 / ES114)Imported
    Taxonomic identifieri312309 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio
    ProteomesiUP000000537: Chromosome I

    Interactioni

    Protein-protein interaction databases

    STRINGi312309.VF_1064.

    Structurei

    3D structure databases

    ProteinModelPortaliQ5E5Y7.
    SMRiQ5E5Y7. Positions 8-448.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0076.
    HOGENOMiHOG000070228.
    KOiK01580.
    OMAiPTFQINF.
    OrthoDBiEOG6TFCPW.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    InterProiIPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view]
    PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q5E5Y7-1 [UniParc]FASTAAdd to Basket

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    MPLHSKNAVR DDLLDDIYSS ADLSLSMPKY KMPEQEHDPR HAYQVIHDEL    50
    MMDGNSRQNL ATFCQTWVED EVHKLMDECI DKNMIDKDEY PQTAELESRC 100
    VHMLADLWNS PDAENTLGCS TTGSSEAAML GGMALKWAWR EKMKKLGKPT 150
    DKPNMICGPV QVCWHKFARY WDIELREIPM EGDRLIMTPE EVIKRCDENT 200
    IGVVPTLGVT FTCQYEPVKA VHEALDKLQE ETGLDIPMHI DAASGGFLAP 250
    FCDPDLEWDF RLPRVKSINA SGHKFGLSPL GVGWVIWRDA SALHEDLIFN 300
    VNYLGGNMPT FALNFSRPGG QIVAQYYNFL RLGKEGYRKI HQACYDTAVY 350
    LSSEIEKLGM FEIIYDGKGG IPAMSWSLKE GVDPGFNLFD LSDRIRSRGW 400
    QIAAYAMPPK REDLVIMRIL VRHGFSRDQA DLLVADLKHC VEFFAKHPIS 450
    HGSDELESSG FNHG 464
    Length:464
    Mass (Da):52,582
    Last modified:March 15, 2005 - v1
    Checksum:i51E50550E542FD6B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000020 Genomic DNA. Translation: AAW85559.1.
    RefSeqiWP_011261695.1. NC_006840.2.
    YP_204447.1. NC_006840.2.

    Genome annotation databases

    EnsemblBacteriaiAAW85559; AAW85559; VF_1064.
    GeneIDi3278475.
    KEGGivfi:VF_1064.
    PATRICi20112728. VBIVibFis127983_1067.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000020 Genomic DNA. Translation: AAW85559.1 .
    RefSeqi WP_011261695.1. NC_006840.2.
    YP_204447.1. NC_006840.2.

    3D structure databases

    ProteinModelPortali Q5E5Y7.
    SMRi Q5E5Y7. Positions 8-448.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 312309.VF_1064.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAW85559 ; AAW85559 ; VF_1064 .
    GeneIDi 3278475.
    KEGGi vfi:VF_1064.
    PATRICi 20112728. VBIVibFis127983_1067.

    Phylogenomic databases

    eggNOGi COG0076.
    HOGENOMi HOG000070228.
    KOi K01580.
    OMAi PTFQINF.
    OrthoDBi EOG6TFCPW.

    Enzyme and pathway databases

    BioCyci AFIS312309:GIWP-1122-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    InterProi IPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view ]
    PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 700601 / ES114Imported.

    Entry informationi

    Entry nameiQ5E5Y7_VIBF1
    AccessioniPrimary (citable) accession number: Q5E5Y7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 15, 2005
    Last sequence update: March 15, 2005
    Last modified: October 1, 2014
    This is version 60 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3