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Protein

Aminotransferase

Gene

aspC

Organism
Vibrio fischeri (strain ATCC 700601 / ES114)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseUniRule annotationImported, Transferase

Enzyme and pathway databases

BioCyciAFIS312309:GIWP-1561-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
AminotransferaseUniRule annotation (EC:2.6.1.-UniRule annotation)
Gene namesi
Name:aspCImported
Ordered Locus Names:VF_1488Imported
OrganismiVibrio fischeri (strain ATCC 700601 / ES114)Imported
Taxonomic identifieri312309 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio
Proteomesi
  • UP000000537 Componenti: Chromosome I

Interactioni

Protein-protein interaction databases

STRINGi312309.VF_1488.

Structurei

3D structure databases

ProteinModelPortaliQ5E4R3.
SMRiQ5E4R3. Positions 4-399.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini30 – 394365Aminotran_1_2InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CGF. Bacteria.
COG1448. LUCA.
HOGENOMiHOG000185899.
KOiK00832.
OMAiPNHKGVF.
OrthoDBiPOG091H00HU.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR000796. Asp_trans.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11879. PTHR11879. 1 hit.
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
PRINTSiPR00799. TRANSAMINASE.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5E4R3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMTMFEKIAA APADPILGLT DEFKNDPRAE KINLGVGIYK NEAGQTPVLT
60 70 80 90 100
TVKKAEAVLL DTEKTKSYLT IQGTAEYGLA VQKLLFGADA QVITEKRAQT
110 120 130 140 150
AQAPGGTGAL RVAGEFIKRQ LGDVKIWISN PTWANHIGVF TAAGIETAQY
160 170 180 190 200
TYYNAETKSK DFAAMLTDLQ QAEAGDVVLL HGCCHNPTGI DPTADEWEEL
210 220 230 240 250
AKLCANKGLL PLFDFAYQGF AKGVEEDAAG LRTFAQYCPE LLVASSFSKN
260 270 280 290 300
FGLYNERVGA FTLVAKDATV AADAFSQVKA IIRSIYSNPP AHGAAVVTHI
310 320 330 340 350
LNDDALRAEW EQEVAEMRDR IQEMRTLFVT TLKEQGVDAD FSFIERQNGM
360 370 380 390
FSFSGLSKEQ VNRLKDEFAI YIVGSGRISV AGMTKDNMLP LCKGIAAVL
Length:399
Mass (Da):43,402
Last modified:March 15, 2005 - v1
Checksum:iD2E642DAB5E9D6F8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000020 Genomic DNA. Translation: AAW85983.1.
RefSeqiWP_011262073.1. NC_006840.2.
YP_204871.1. NC_006840.2.

Genome annotation databases

EnsemblBacteriaiAAW85983; AAW85983; VF_1488.
GeneIDi3278794.
KEGGivfi:VF_1488.
PATRICi20113608. VBIVibFis127983_1505.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000020 Genomic DNA. Translation: AAW85983.1.
RefSeqiWP_011262073.1. NC_006840.2.
YP_204871.1. NC_006840.2.

3D structure databases

ProteinModelPortaliQ5E4R3.
SMRiQ5E4R3. Positions 4-399.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi312309.VF_1488.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAW85983; AAW85983; VF_1488.
GeneIDi3278794.
KEGGivfi:VF_1488.
PATRICi20113608. VBIVibFis127983_1505.

Phylogenomic databases

eggNOGiENOG4105CGF. Bacteria.
COG1448. LUCA.
HOGENOMiHOG000185899.
KOiK00832.
OMAiPNHKGVF.
OrthoDBiPOG091H00HU.

Enzyme and pathway databases

BioCyciAFIS312309:GIWP-1561-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR000796. Asp_trans.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11879. PTHR11879. 1 hit.
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
PRINTSiPR00799. TRANSAMINASE.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ5E4R3_VIBF1
AccessioniPrimary (citable) accession number: Q5E4R3
Entry historyi
Integrated into UniProtKB/TrEMBL: March 15, 2005
Last sequence update: March 15, 2005
Last modified: September 7, 2016
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.