Q5E1X1 (Q5E1X1_VIBF1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
GGDEF domain protein EMBL AAW86975.1

Gene names

Ordered Locus Names:

VF_2480

Organism

Vibrio fischeri (strain ATCC 700601 / ES114) EMBL AAW86975.1

Taxonomic identifier

312309 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Aliivibrio

Protein attributes

Sequence length	405 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

	Sequence		Length	Mass (Da)
	Q5E1X1 [UniParc]. Last modified March 15, 2005. Version 1. Checksum: A4C00FCAEFDB817E	FASTA	405	46,570
	10 20 30 40 50 60 MYAYVARQPI LNRKKQTIGY ELLFRDGASN AFPDMEANQA TCRLLVENFM ATGNNPALES 70 80 90 100 110 120 PRSFINFPQE SLISLVPTAF PKKKIVIEVL ETCTPNDELF SAIKHLHRMG YVIALDDFSL 130 140 150 160 170 180 DPEWDRFLPY SHIVKLDIMQ LGLERACAYV KQRKRQGCKR HYLAERVETN EEFQQALDVG 190 200 210 220 230 240 FHFFQGYFFS KPEIIKNRVV KPEELLTVQL FQEVCREEVD FTRIEQLISQ DVSLSYQLLK 250 260 270 280 290 300 FVNTAAVRLE NPISSFKQAL VYLGEEQIKM FVTLIATAHA AINKPKELYK QSLVKGRFCE 310 320 330 340 350 360 LMIYRCQNGT PGQQAFIVGL FSLLDALLDK KLDDVLVQLS LSQDIEKAIL IREGLLGSML 370 380 390 400 ELYENIDTGN WENIDKLSRQ LGFSAKTVES TYQEAVKWYQ SILSK

References

[1]

"Complete genome sequence of Vibrio fischeri: a symbiotic bacterium with pathogenic congeners." Ruby E.G., Urbanowski M., Campbell J., Dunn A., Faini M., Gunsalus R., Lostroh P., Lupp C., McCann J., Millikan D., Schaefer A., Stabb E., Stevens A., Visick K., Whistler C., Greenberg E.P. Proc. Natl. Acad. Sci. U.S.A. 102:3004-3009(2005) [PubMed: 15703294] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700601 / ES114.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000020 Genomic DNA. Translation: AAW86975.1.
RefSeq	YP_205863.1. NC_006840.2.
3D structure databases
ProteinModelPortal	Q5E1X1.
ModBase	Search...
Protein-protein interaction databases
STRING	Q5E1X1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3277759.
GenomeReviews	Gene locus VF_2480 in contig CP000020_GR.
KEGG	vfi:VF_2480.
NMPDR	fig|312309.3.peg.2480.
PATRIC	20115738. VBIVibFis127983_2507.
Phylogenomic databases
eggNOG	COG3434.
HOGENOM	HBG537479.
OMA	LERACAY.
ProtClustDB	CLSK712239.
Enzyme and pathway databases
BioCyc	VFIS312309:VF2480-MONOMER.
Family and domain databases
InterPro	IPR014408. dGMP_Pdiesterase_EAL/HD-GYP. IPR001633. Diguanylate_PEstase_EAL_dom. IPR013976. HDOD. [Graphical view]
Gene3D	G3DSA:3.20.20.450. G3DSA:3.20.20.450. 1 hit. G3DSA:1.10.3150.10. HDOD. 1 hit.
KO	K07181.
Pfam	PF00563. EAL. 1 hit. PF08668. HDOD. 1 hit. [Graphical view]
PIRSF	PIRSF003180. DiGMPpdiest_YuxH. 1 hit.
SMART	SM00052. EAL. 1 hit. [Graphical view]
SUPFAM	SSF141868. SSF141868. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q5E1X1_VIBF1

Accession

Primary (citable) accession number: Q5E1X1

Entry history

Integrated into UniProtKB/TrEMBL:	March 15, 2005
Last sequence update:	March 15, 2005
Last modified:	December 14, 2011
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)