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Q5E0H4

- DEOD2_VIBF1

UniProt

Q5E0H4 - DEOD2_VIBF1

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Protein
Purine nucleoside phosphorylase DeoD-type 2
Gene
deoD2, VF_A0402
Organism
Vibrio fischeri (strain ATCC 700601 / ES114)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate.UniRule annotation
Purine deoxynucleoside + phosphate = purine + 2'-deoxy-alpha-D-ribose 1-phosphate.UniRule annotation

GO - Molecular functioni

  1. purine-nucleoside phosphorylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. purine nucleoside metabolic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Enzyme and pathway databases

BioCyciAFIS312309:GIWP-3144-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Purine nucleoside phosphorylase DeoD-type 2 (EC:2.4.2.1)
Short name:
PNP 2
Gene namesi
Name:deoD2
Ordered Locus Names:VF_A0402
OrganismiVibrio fischeri (strain ATCC 700601 / ES114)
Taxonomic identifieri312309 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio
ProteomesiUP000000537: Chromosome II

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 236236Purine nucleoside phosphorylase DeoD-type 2UniRule annotation
PRO_0000063172Add
BLAST

Interactioni

Subunit structurei

Homohexamer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi312309.VF_A0402.

Structurei

3D structure databases

ProteinModelPortaliQ5E0H4.
SMRiQ5E0H4. Positions 2-234.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0813.
HOGENOMiHOG000274896.
KOiK03784.
OMAiHELISEF.
OrthoDBiEOG6BKJC5.

Family and domain databases

Gene3Di3.40.50.1580. 1 hit.
HAMAPiMF_01627. Pur_nucleosid_phosp.
InterProiIPR004402. DeoD-type.
IPR018017. Nucleoside_phosphorylase.
IPR000845. Nucleoside_phosphorylase_d.
[Graphical view]
PANTHERiPTHR21234. PTHR21234. 1 hit.
PfamiPF01048. PNP_UDP_1. 1 hit.
[Graphical view]
SUPFAMiSSF53167. SSF53167. 1 hit.
TIGRFAMsiTIGR00107. deoD. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5E0H4-1 [UniParc]FASTAAdd to Basket

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MATPHINAQA GDFAETVLMP GDPLRAKFIA ENFLEDVKQV CDVRNMFGYT    50
GTYKGKKVSV MGHGMGIPSC CIYVHELIAE YGVKNVIRVG SCGAVHDDVK 100
LMDVVIGMGA STDSKVNRIR FNNHDFAAIA DFGLLETAVG QARELNVPVK 150
VGNVFSADLF YSPEADLFDK MEKLGILGVD MEAAGIYGVA ADLGAKALTI 200
LTVSDHIKRG EKLSSEDRQK SFNDMMTVAL ETAIKL 236
Length:236
Mass (Da):25,511
Last modified:March 15, 2005 - v1
Checksum:iF0274918A6D90B2A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000021 Genomic DNA. Translation: AAW87472.1.
RefSeqiYP_206360.1. NC_006841.2.

Genome annotation databases

EnsemblBacteriaiAAW87472; AAW87472; VF_A0402.
GeneIDi3280648.
KEGGivfi:VF_A0402.
PATRICi20116784. VBIVibFis127983_3005.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000021 Genomic DNA. Translation: AAW87472.1 .
RefSeqi YP_206360.1. NC_006841.2.

3D structure databases

ProteinModelPortali Q5E0H4.
SMRi Q5E0H4. Positions 2-234.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 312309.VF_A0402.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAW87472 ; AAW87472 ; VF_A0402 .
GeneIDi 3280648.
KEGGi vfi:VF_A0402.
PATRICi 20116784. VBIVibFis127983_3005.

Phylogenomic databases

eggNOGi COG0813.
HOGENOMi HOG000274896.
KOi K03784.
OMAi HELISEF.
OrthoDBi EOG6BKJC5.

Enzyme and pathway databases

BioCyci AFIS312309:GIWP-3144-MONOMER.

Family and domain databases

Gene3Di 3.40.50.1580. 1 hit.
HAMAPi MF_01627. Pur_nucleosid_phosp.
InterProi IPR004402. DeoD-type.
IPR018017. Nucleoside_phosphorylase.
IPR000845. Nucleoside_phosphorylase_d.
[Graphical view ]
PANTHERi PTHR21234. PTHR21234. 1 hit.
Pfami PF01048. PNP_UDP_1. 1 hit.
[Graphical view ]
SUPFAMi SSF53167. SSF53167. 1 hit.
TIGRFAMsi TIGR00107. deoD. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700601 / ES114.

Entry informationi

Entry nameiDEOD2_VIBF1
AccessioniPrimary (citable) accession number: Q5E0H4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 10, 2006
Last sequence update: March 15, 2005
Last modified: May 14, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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