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Protein

Glycogen synthase

Gene

glgA

Organism
Vibrio fischeri (strain ATCC 700601 / ES114)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathway:iglycogen biosynthesis

This protein is involved in the pathway glycogen biosynthesis, which is part of Glycan biosynthesis.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway glycogen biosynthesis and in Glycan biosynthesis.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei20 – 201ADP-glucoseUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciAFIS312309:GIWP-3560-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthaseUniRule annotation
Gene namesi
Name:glgAUniRule annotation
Ordered Locus Names:VF_A0805
OrganismiVibrio fischeri (strain ATCC 700601 / ES114)
Taxonomic identifieri312309 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio
ProteomesiUP000000537 Componenti: Chromosome II

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 487487Glycogen synthasePRO_0000230271Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi312309.VF_A0805.

Structurei

3D structure databases

ProteinModelPortaliQ5DZC1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5DZC1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVTKTLSIVF VASEVDGLIK SGGLADVAKA LPKSLKELGH SVQIVMPAYK
60 70 80 90 100
TIAGRDDAEI ILTTQLEHWP HTAYQVRSLN VDGIPVFAIE SGDYFERAEM
110 120 130 140 150
YAENNQAYAD NGERFAFFSA ATLDLLPKLL NKKPDIIHVN DWHTGLIPYL
160 170 180 190 200
LKKRYVENEF YHQTRSVLSI HNAVFKGIFH YDEIACLSEF KSHFVPEASI
210 220 230 240 250
SHTHVSMLKA GVQCADKINA VSPNYAKELL TELGSHGMAS DFQDRESDLI
260 270 280 290 300
GILNGCDYSE WNPEKDSYIP KQFKVNRISM VRGKKACKAA LQQELSLPQK
310 320 330 340 350
DVAMYGMVCR LTNQKGIQYL LPILEQFLKN DLQLVIVGTG DPVLATRLTE
360 370 380 390 400
IAQEHSDKFA FVEAYDNKLA HWVEAGSDFF IMPSEFEPCG LNQIYSMAYG
410 420 430 440 450
TLPIVREVGG LKDSVNNYDD DIENATGFSF KNPEPMELLL VLMRSLLLYS
460 470 480
QNLNEVKRVQ LHAMKQDFCW NKAALKYIEM YRTAINS
Length:487
Mass (Da):54,916
Last modified:April 4, 2006 - v2
Checksum:iD0B33A80244A2F4C
GO

Sequence cautioni

The sequence AAW87875.1 differs from that shown. Reason: Erroneous initiation. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000021 Genomic DNA. Translation: AAW87875.1. Different initiation.
RefSeqiYP_206763.1. NC_006841.2.

Genome annotation databases

EnsemblBacteriaiAAW87875; AAW87875; VF_A0805.
GeneIDi3280424.
KEGGivfi:VF_A0805.
PATRICi20117607. VBIVibFis127983_3407.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000021 Genomic DNA. Translation: AAW87875.1. Different initiation.
RefSeqiYP_206763.1. NC_006841.2.

3D structure databases

ProteinModelPortaliQ5DZC1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi312309.VF_A0805.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAW87875; AAW87875; VF_A0805.
GeneIDi3280424.
KEGGivfi:VF_A0805.
PATRICi20117607. VBIVibFis127983_3407.

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OrthoDBiEOG6JTC6Z.

Enzyme and pathway databases

UniPathwayiUPA00164.
BioCyciAFIS312309:GIWP-3560-MONOMER.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700601 / ES114.

Entry informationi

Entry nameiGLGA_VIBF1
AccessioniPrimary (citable) accession number: Q5DZC1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 4, 2006
Last sequence update: April 4, 2006
Last modified: July 22, 2015
This is version 65 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.