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Q5DZC1

- GLGA_VIBF1

UniProt

Q5DZC1 - GLGA_VIBF1

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Protein

Glycogen synthase

Gene

glgA

Organism
Vibrio fischeri (strain ATCC 700601 / ES114)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei20 – 201ADP-glucoseUniRule annotation

GO - Molecular functioni

  1. starch synthase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciAFIS312309:GIWP-3560-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthaseUniRule annotation
Gene namesi
Name:glgAUniRule annotation
Ordered Locus Names:VF_A0805
OrganismiVibrio fischeri (strain ATCC 700601 / ES114)
Taxonomic identifieri312309 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio
ProteomesiUP000000537: Chromosome II

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 487487Glycogen synthasePRO_0000230271Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi312309.VF_A0805.

Structurei

3D structure databases

ProteinModelPortaliQ5DZC1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiLLKTMYA.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5DZC1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVTKTLSIVF VASEVDGLIK SGGLADVAKA LPKSLKELGH SVQIVMPAYK
60 70 80 90 100
TIAGRDDAEI ILTTQLEHWP HTAYQVRSLN VDGIPVFAIE SGDYFERAEM
110 120 130 140 150
YAENNQAYAD NGERFAFFSA ATLDLLPKLL NKKPDIIHVN DWHTGLIPYL
160 170 180 190 200
LKKRYVENEF YHQTRSVLSI HNAVFKGIFH YDEIACLSEF KSHFVPEASI
210 220 230 240 250
SHTHVSMLKA GVQCADKINA VSPNYAKELL TELGSHGMAS DFQDRESDLI
260 270 280 290 300
GILNGCDYSE WNPEKDSYIP KQFKVNRISM VRGKKACKAA LQQELSLPQK
310 320 330 340 350
DVAMYGMVCR LTNQKGIQYL LPILEQFLKN DLQLVIVGTG DPVLATRLTE
360 370 380 390 400
IAQEHSDKFA FVEAYDNKLA HWVEAGSDFF IMPSEFEPCG LNQIYSMAYG
410 420 430 440 450
TLPIVREVGG LKDSVNNYDD DIENATGFSF KNPEPMELLL VLMRSLLLYS
460 470 480
QNLNEVKRVQ LHAMKQDFCW NKAALKYIEM YRTAINS
Length:487
Mass (Da):54,916
Last modified:April 4, 2006 - v2
Checksum:iD0B33A80244A2F4C
GO

Sequence cautioni

The sequence AAW87875.1 differs from that shown. Reason: Erroneous initiation.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000021 Genomic DNA. Translation: AAW87875.1. Different initiation.
RefSeqiYP_206763.1. NC_006841.2.

Genome annotation databases

EnsemblBacteriaiAAW87875; AAW87875; VF_A0805.
GeneIDi3280424.
KEGGivfi:VF_A0805.
PATRICi20117607. VBIVibFis127983_3407.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000021 Genomic DNA. Translation: AAW87875.1 . Different initiation.
RefSeqi YP_206763.1. NC_006841.2.

3D structure databases

ProteinModelPortali Q5DZC1.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 312309.VF_A0805.

Protein family/group databases

CAZyi GT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAW87875 ; AAW87875 ; VF_A0805 .
GeneIDi 3280424.
KEGGi vfi:VF_A0805.
PATRICi 20117607. VBIVibFis127983_3407.

Phylogenomic databases

eggNOGi COG0297.
HOGENOMi HOG000294940.
KOi K00703.
OMAi LLKTMYA.
OrthoDBi EOG6JTC6Z.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci AFIS312309:GIWP-3560-MONOMER.

Family and domain databases

HAMAPi MF_00484. Glycogen_synth.
InterProi IPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view ]
Pfami PF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02095. glgA. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700601 / ES114.

Entry informationi

Entry nameiGLGA_VIBF1
AccessioniPrimary (citable) accession number: Q5DZC1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 4, 2006
Last sequence update: April 4, 2006
Last modified: October 1, 2014
This is version 61 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3