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Q5DYQ2 (Q5DYQ2_VIBF1) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 61. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:sypE EMBL AAW88094.1
Ordered Locus Names:VF_A1024 EMBL AAW88094.1
OrganismVibrio fischeri (strain ATCC 700601 / ES114) [Reference proteome] [HAMAP] EMBL AAW88094.1
Taxonomic identifier312309 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio

Protein attributes

Sequence length505 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q5DYQ2 [UniParc].

Last modified March 15, 2005. Version 1.
Checksum: DE932B36B08673F9

FASTA50556,726
        10         20         30         40         50         60 
MNSTLLFSDT KPTSLESVRV LRQSLSKILK NLEINTTVLN QCLLCFSEWS TNLVLHPIQP 

        70         80         90        100        110        120 
SKNISLTLRK SNSHWQIDII DDGIPWDPTE QHKESELSEF SLKCGGRGID IIQDQTDDIR 

       130        140        150        160        170        180 
YKSTIENNTL SLLWERSPSH KHPHILIVED DAIQSKLLQA YLKSNFSITA TTNGREALQF 

       190        200        210        220        230        240 
LQHNTVDLII SDIQMPEMSG LELRSQLEKE NNFSIPFIFL SNLQDTNTVN CAAELGIDDF 

       250        260        270        280        290        300 
LQKPVQKTQL IHSITRVLGR FHQVYHALSE QLNQKIAHTL LPQVEAHSDK WKLITQQRTV 

       310        320        330        340        350        360 
GQGGGDFTLS RANNNNTLLL LADVMGHDES AKFFAYAYAG YVRGLMQHAD LTQPSQLLSQ 

       370        380        390        400        410        420 
LSNNAFKDQL LSQTMLTTCC LSFIGDDTIK ISSAGHPKPL HITPRGINII EIEGTLPGLL 

       430        440        450        460        470        480 
PTTHYKETTI SMKYGERLAL FTDGLFESGD TISERDTLEK AIKKQLIETL HLPIEQAINQ 

       490        500 
IIKTFDALAG TPPNDDALLL LIENQ 

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References

[1]"Complete genome sequence of Vibrio fischeri: a symbiotic bacterium with pathogenic congeners."
Ruby E.G., Urbanowski M., Campbell J., Dunn A., Faini M., Gunsalus R., Lostroh P., Lupp C., McCann J., Millikan D., Schaefer A., Stabb E., Stevens A., Visick K., Whistler C., Greenberg E.P.
Proc. Natl. Acad. Sci. U.S.A. 102:3004-3009(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700601 / ES114.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000021 Genomic DNA. Translation: AAW88094.1.
RefSeqYP_206982.1. NC_006841.2.

3D structure databases

ProteinModelPortalQ5DYQ2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING312309.VF_A1024.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAW88094; AAW88094; VF_A1024.
GeneID3280139.
KEGGvfi:VF_A1024.
PATRIC20118045. VBIVibFis127983_3623.

Phylogenomic databases

eggNOGCOG0745.
HOGENOMHOG000073300.
OMATFRLHAL.
OrthoDBEOG6G4VQG.
ProtClustDBCLSK937045.

Enzyme and pathway databases

BioCycAFIS312309:GIWP-3784-MONOMER.

Family and domain databases

InterProIPR011006. CheY-like_superfamily.
IPR003594. HATPase_ATP-bd.
IPR001932. PP2C-like_dom.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamPF13581. HATPase_c_2. 1 hit.
PF00072. Response_reg. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMSSF52172. SSF52172. 1 hit.
SSF81606. SSF81606. 1 hit.
PROSITEPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5DYQ2_VIBF1
AccessionPrimary (citable) accession number: Q5DYQ2
Entry history
Integrated into UniProtKB/TrEMBL: March 15, 2005
Last sequence update: March 15, 2005
Last modified: April 16, 2014
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)